Disruption of maternal gut microbiota during gestation alters offspring microbiota and immunity

by Donald D. Nyangahu, Katie S. Lennard, Bryan P. Brown, Matthew G. Darby, Jerome M. Wendoh, Enock Havyarimana, Peter Smith, James Butcher, Alain Stintzi, Nicola Mulder, William Horsnell, Heather B. Jaspan
Published 2018-07-01

A common molecular signature of patients with sickle cell disease revealed by microarray meta-analysis and a genome-wide association study.

by Cherif Ben Hamda, Raphael Sangeda, Liberata Mwita, Ayton Meintjes, Siana Nkya, Sumir Panji, Nicola Mulder, Lamia Guizani-Tabbane, Alia Benkahla, Julie Makani, Kais Ghedira, H3ABioNet Consortium
Published 2018-01-01

Challenges and Considerations for Delivering Bioinformatics Training in LMICs: Perspectives From Pan-African and Latin American Bioinformatics Networks

by Verena Ras, Patricia Carvajal-López, Piraveen Gopalasingam, Alice Matimba, Paballo Abel Chauke, Nicola Mulder, Fatma Guerfali, Victoria Dominguez Del Angel, Alejandro Reyes, Guilherme Oliveira, Javier De Las Rivas, Marco Cristancho
Published 2021-07-01

Using a multiple-delivery-mode training approach to develop local capacity and infrastructure for advanced bioinformatics in Africa.

by Verena Ras, Gerrit Botha, Shaun Aron, Katie Lennard, Imane Allali, Shantelle Claassen-Weitz, Kilaza Samson Mwaikono, Dane Kennedy, Jessica R Holmes, Gloria Rendon, Sumir Panji, Christopher J Fields, Nicola Mulder
Published 2021-02-01

Correction: GOBLET: The Global Organisation for Bioinformatics Learning, Education and Training.

by Teresa K Attwood, Erik Bongcam-Rudloff, Michelle E Brazas, Manuel Corpas, Pascale Gaudet, Fran Lewitter, Nicola Mulder, Patricia M Palagi, Maria Victoria Schneider, Celia W G van Gelder, GOBLET Consortium
Published 2015-05-01

GOBLET: the Global Organisation for Bioinformatics Learning, Education and Training.

by Teresa K Attwood, Erik Bongcam-Rudloff, Michelle E Brazas, Manuel Corpas, Pascale Gaudet, Fran Lewitter, Nicola Mulder, Patricia M Palagi, Maria Victoria Schneider, Celia W G van Gelder, GOBLET Consortium
Published 2015-04-01

High rates of bacterial vaginosis and Chlamydia in a low-income, high-population-density community in Cape Town

by Katie S. Lennard, Smritee Dabee, Shaun L. Barnabas, Enock Havyarimana, Shameem Z. Jaumdally, Gerrit Botha, Nonhlanhla N. Mkhize, Linda-Gail Bekker, Glenda Gray, Nicola Mulder, Jo-Ann Passmore, Heather B. Jaspan
Published 2017-12-01

Hoë voorkomskoers van bakteriële vaginose en Chlamydia in ’n lae-inkomste, hoë-bevolkingsdigtheid gemeenskap in Kaapstad

by Katie S. Lennard, Smritee Dabee, Shaun L. Barnabas, Enock Havyarimana, Shameem Z. Jaumdally, Gerrit Botha, Nonhlanhla N. Mkhize, Linda-Gail Bekker, Glenda Gray, Nicola Mulder, Jo-Ann Passmore, Heather B. Jaspan
Published 2017-12-01

Strategies and opportunities for promoting bioinformatics in Zimbabwe.

by Ryman Shoko, Justen Manasa, Mcebisi Maphosa, Joshua Mbanga, Reagan Mudziwapasi, Victoria Nembaware, Walter T Sanyika, Tawanda Tinago, Zedias Chikwambi, Cephas Mawere, Alice Matimba, Grace Mugumbate, Jonathan Mufandaedza, Nicola Mulder, Hugh Patterton, Hugh Patterton
Published 2018-11-01

Ten simple rules for organizing a webinar series.

by Faisal M Fadlelmola, Sumir Panji, Azza E Ahmed, Amel Ghouila, Wisdom A Akurugu, Jean-Baka Domelevo Entfellner, Oussema Souiai, Nicola Mulder, H3ABioNet Research working group as members of the H3Africa Consortium
Published 2019-04-01

Applying, Evaluating and Refining Bioinformatics Core Competencies (An Update from the Curriculum Task Force of ISCB's Education Committee).

by Lonnie Welch, Cath Brooksbank, Russell Schwartz, Sarah L Morgan, Bruno Gaeta, Alastair M Kilpatrick, Daniel Mietchen, Benjamin L Moore, Nicola Mulder, Mark Pauley, William Pearson, Predrag Radivojac, Naomi Rosenberg, Anne Rosenwald, Gabriella Rustici, Tandy Warnow
Published 2016-05-01

Real-Time Investigation of Tuberculosis Transmission: Developing the Respiratory Aerosol Sampling Chamber (RASC).

by Robin Wood, Carl Morrow, Clifton E Barry, Wayne A Bryden, Charles J Call, Anthony J Hickey, Charles E Rodes, Thomas J Scriba, Jonathan Blackburn, Chacha Issarow, Nicola Mulder, Jeremy Woodward, Atica Moosa, Vinayak Singh, Valerie Mizrahi, Digby F Warner
Published 2016-01-01

Whole-genome sequencing for an enhanced understanding of genetic variation among South Africans

by Ananyo Choudhury, Michèle Ramsay, Scott Hazelhurst, Shaun Aron, Soraya Bardien, Gerrit Botha, Emile R. Chimusa, Alan Christoffels, Junaid Gamieldien, Mahjoubeh J. Sefid-Dashti, Fourie Joubert, Ayton Meintjes, Nicola Mulder, Raj Ramesar, Jasper Rees, Kathrine Scholtz, Dhriti Sengupta, Himla Soodyall, Philip Venter, Louise Warnich, Michael S. Pepper
Published 2017-12-01

Genomic Research Data Generation, Analysis and Sharing – Challenges in the African Setting

by Nicola Mulder, Clement A. Adebamowo, Sally N. Adebamowo, Oladimeji Adebayo, Osimhiarherhuo Adeleye, Mohamed Alibi, Shakuntala Baichoo, Alia Benkahla, Faisal M. Fadlelmola, Hassan Ghazal, Kais Ghedira, Alice Matimba, Ahmed Moussa, Zahra Mungloo-Dilmohamud, Mayowa O. Owolabi, Fouzia Radouani, Charles N. Rotimi, Dan J. Stein, Oussama Souiai
Published 2017-11-01

The African Genomic Medicine Training Initiative (AGMT): Showcasing a Community and Framework Driven Genomic Medicine Training for Nurses in Africa

by Victoria Nembaware, African Genomic Medicine Training Initiative, Nicola Mulder, Omar Abidi, MB Akanle, Stuart Alvaro Ali, Cliff Asher Aliga, Paballo Chauke, Minnet Cotzee, Collet Dandara, Faisal M. Fadlelmola, Michael B. Fawale, Pedro L. Fernandes, Karen Ghansah, Zainab Abimbola Kashim, Samar Kamal Kassim, Morenikeji A. Komolafe, Guida Landouré, Cordelia Leisegang, Ebony B Madden, Kuda Majada, Malebo Malope, Mamadou Kaba, Keofentse Mathuba, Alice Matimba, George Mochamah, Sarah L Morgan, Nicola Mulder, Nash Oyekanmi, Nchangwi S Munung, Victoria Nembaware, Temitope Esther Owoeye, Michael Sean Pepper, Lunelle Pienaar, Elize Pietersen, Fouzia Radouani, Raj S Ramesar, Michelle Skelton, Sununguko Wata Mpoloka, Wayengerera Misaki, Ambroise Wonkam, Adetunji Samuel Adesina, Tina-Marié Wessels
Published 2019-12-01

Microbial function and genital inflammation in young South African women at high risk of HIV infection

by Arghavan Alisoltani, Monalisa T. Manhanzva, Matthys Potgieter, Christina Balle, Liam Bell, Elizabeth Ross, Arash Iranzadeh, Michelle du Plessis, Nina Radzey, Zac McDonald, Bridget Calder, Imane Allali, Nicola Mulder, Smritee Dabee, Shaun Barnabas, Hoyam Gamieldien, Adam Godzik, Jonathan M. Blackburn, David L. Tabb, Linda-Gail Bekker, Heather B. Jaspan, Jo-Ann S. Passmore, Lindi Masson
Published 2020-11-01

Designing a course model for distance-based online bioinformatics training in Africa: The H3ABioNet experience.

by Kim T Gurwitz, Shaun Aron, Sumir Panji, Suresh Maslamoney, Pedro L Fernandes, David P Judge, Amel Ghouila, Jean-Baka Domelevo Entfellner, Fatma Z Guerfali, Colleen Saunders, Ahmed Mansour Alzohairy, Samson P Salifu, Rehab Ahmed, Ruben Cloete, Jonathan Kayondo, Deogratius Ssemwanga, Nicola Mulder, H3ABioNet Consortium's Education Training and Working Group as members of the H3Africa Consortium
Published 2017-10-01

Organizing and running bioinformatics hackathons within Africa: The H3ABioNet cloud computing experience [version 2; peer review: 2 approved, 1 approved with reservations]

by Azza E. Ahmed, Phelelani T. Mpangase, Sumir Panji, Shakuntala Baichoo, Yassine Souilmi, Faisal M. Fadlelmola, Mustafa Alghali, Shaun Aron, Hocine Bendou, Eugene De Beste, Mamana Mbiyavanga, Oussema Souiai, Long Yi, Jennie Zermeno, Don Armstrong, Brian D. O'Connor, Liudmila Sergeevna Mainzer, Michael R. Crusoe, Ayton Meintjes, Peter Van Heusden, Gerrit Botha, Fourie Joubert, C. Victor Jongeneel, Scott Hazelhurst, Nicola Mulder
Published 2019-08-01

A genomics network established to respond rapidly to public health threats in South Africa

by Nokukhanya Msomi, Koleka Mlisana, Tulio de Oliveira, Nokukhanya Msomi, Koleka Mlisana, Carolyn Willianson, Jinal N. Bhiman, Dominique Goedhals, Susan Engelbrecht, Gert Van Zyl, Wolfgang Preiser, Diana Hardie, Marvin Hsiao, Nicola Mulder, Darren Martin, Alan Christoffels, Denis York, Jennifer Giandhari, Eduan Wilkinson, Sureshnee Pillay, Houriiyah Tegally, San Emmanuel James, Aquilah Kanzi, Richard John Lessells, Tulio de Oliveira
Published 2020-10-01

Developing reproducible bioinformatics analysis workflows for heterogeneous computing environments to support African genomics

by Shakuntala Baichoo, Yassine Souilmi, Sumir Panji, Gerrit Botha, Ayton Meintjes, Scott Hazelhurst, Hocine Bendou, Eugene de Beste, Phelelani T. Mpangase, Oussema Souiai, Mustafa Alghali, Long Yi, Brian D. O’Connor, Michael Crusoe, Don Armstrong, Shaun Aron, Fourie Joubert, Azza E. Ahmed, Mamana Mbiyavanga, Peter van Heusden, Lerato E. Magosi, Jennie Zermeno, Liudmila Sergeevna Mainzer, Faisal M. Fadlelmola, C. Victor Jongeneel, Nicola Mulder
Published 2018-11-01