Epigenomics in environmental health

by Carmen J Marsit, Brock C Christensen
Published 2011-11-01

Methylation-to-Expression Feature Models of Breast Cancer Accurately Predict Overall Survival, Distant-Recurrence Free Survival, and Pathologic Complete Response in Multiple Cohort...

by Jeffrey A. Thompson, Brock C. Christensen, Carmen J. Marsit
Published 2018-03-01

Pan-Cancer Analysis Reveals Differential Susceptibility of Bidirectional Gene Promoters to DNA Methylation, Somatic Mutations, and Copy Number Alterations

by Jeffrey A. Thompson, Brock C. Christensen, Carmen J. Marsit
Published 2018-08-01

Microbial Communities in Human Milk Relate to Measures of Maternal Weight

by Sara N. Lundgren, Sara N. Lundgren, Juliette C. Madan, Juliette C. Madan, Margaret R. Karagas, Margaret R. Karagas, Hilary G. Morrison, Anne G. Hoen, Anne G. Hoen, Brock C. Christensen, Brock C. Christensen, Brock C. Christensen
Published 2019-12-01

Normal breast tissue DNA methylation differences at regulatory elements are associated with the cancer risk factor age

by Kevin C. Johnson, E. Andres Houseman, Jessica E. King, Brock C. Christensen
Published 2017-07-01

Absence of an embryonic stem cell DNA methylation signature in human cancer

by Ze Zhang, John K. Wiencke, Devin C. Koestler, Lucas A. Salas, Brock C. Christensen, Karl T. Kelsey
Published 2019-07-01

MethylNet: an automated and modular deep learning approach for DNA methylation analysis

by Joshua J. Levy, Alexander J. Titus, Curtis L. Petersen, Youdinghuan Chen, Lucas A. Salas, Brock C. Christensen
Published 2020-03-01

Maternal swimming pool exposure during pregnancy in relation to birth outcomes and cord blood DNA methylation among private well users

by Lucas A. Salas, Emily R. Baker, Mark J. Nieuwenhuijsen, Carmen J. Marsit, Brock C. Christensen, Margaret R. Karagas
Published 2019-02-01

Integrative DNA methylation and gene expression analyses identify DNA packaging and epigenetic regulatory genes associated with low motility sperm.

by Sara E Pacheco, E Andres Houseman, Brock C Christensen, Carmen J Marsit, Karl T Kelsey, Mark Sigman, Kim Boekelheide
Published 2011-01-01

5-Hydroxymethylcytosine localizes to enhancer elements and is associated with survival in glioblastoma patients

by Kevin C. Johnson, E. Andres Houseman, Jessica E. King, Katharine M. von Herrmann, Camilo E. Fadul, Brock C. Christensen
Published 2016-11-01

An optimized library for reference-based deconvolution of whole-blood biospecimens assayed using the Illumina HumanMethylationEPIC BeadArray

by Lucas A. Salas, Devin C. Koestler, Rondi A. Butler, Helen M. Hansen, John K. Wiencke, Karl T. Kelsey, Brock C. Christensen
Published 2018-05-01

Maternal diet during pregnancy is related with the infant stool microbiome in a delivery mode-dependent manner

by Sara N. Lundgren, Juliette C. Madan, Jennifer A. Emond, Hilary G. Morrison, Brock C. Christensen, Margaret R. Karagas, Anne G. Hoen
Published 2018-07-01

RNASEL and MIR146A SNP-SNP interaction as a susceptibility factor for non-melanoma skin cancer.

by Shohreh F Farzan, Margaret R Karagas, Brock C Christensen, Zhongze Li, Jacquelyn K Kuriger, Heather H Nelson, New Hampshire Skin Cancer Study
Published 2014-01-01

Molecular and epigenetic profiles of BRCA1-like hormone-receptor-positive breast tumors identified with development and application of a copy-number-based classifier

by Youdinghuan Chen, Yue Wang, Lucas A. Salas, Todd W. Miller, Kenneth Mark, Jonathan D. Marotti, Arminja N. Kettenbach, Chao Cheng, Brock C. Christensen
Published 2019-01-01

Acute hypersensitivity of pluripotent testicular cancer-derived embryonal carcinoma to low-dose 5-aza deoxycytidine is associated with global DNA Damage-associated p53 activation,...

by Bijesh K Biswal, Maroun J Beyrouthy, Mary P Hever-Jardine, David Armstrong, Craig R Tomlinson, Brock C Christensen, Carmen J Marsit, Michael J Spinella
Published 2012-01-01

A coding variant in TMC8 (EVER2) is associated with high risk HPV infection and head and neck cancer risk.

by Caihua Liang, Karl T Kelsey, Michael D McClean, Brock C Christensen, Carmen J Marsit, Margaret R Karagas, Tim Waterboer, Michael Pawlita, Heather H Nelson
Published 2015-01-01

MethylSPWNet and MethylCapsNet: Biologically Motivated Organization of DNAm Neural Networks, Inspired by Capsule Networks

by Joshua J. Levy, Youdinghuan Chen, Nasim Azizgolshani, Curtis L. Petersen, Alexander J. Titus, Erika L. Moen, Louis J. Vaickus, Lucas A. Salas, Brock C. Christensen
Published 2021-08-01

Genome-wide DNA methylation profiling shows a distinct epigenetic signature associated with lung macrophages in cystic fibrosis

by Youdinghuan Chen, David A. Armstrong, Lucas A. Salas, Haley F. Hazlett, Amanda B. Nymon, John A. Dessaint, Daniel S. Aridgides, Diane L. Mellinger, Xiaoying Liu, Brock C. Christensen, Alix Ashare
Published 2018-12-01

Genetic and epigenetic somatic alterations in head and neck squamous cell carcinomas are globally coordinated but not locally targeted.

by Graham M Poage, Brock C Christensen, E Andres Houseman, Michael D McClean, John K Wiencke, Marshall R Posner, John R Clark, Heather H Nelson, Carmen J Marsit, Karl T Kelsey
Published 2010-03-01

Identification of methylated genes associated with aggressive bladder cancer.

by Carmen J Marsit, E Andres Houseman, Brock C Christensen, Luc Gagne, Margaret R Wrensch, Heather H Nelson, Joseph Wiemels, Shichun Zheng, John K Wiencke, Angeline S Andrew, Alan R Schned, Margaret R Karagas, Karl T Kelsey
Published 2010-08-01