Multiplexed, targeted profiling of single-cell proteomes and transcriptomes in a single reaction

by Li, Shuqiang, Darmanis, Spyros, Lundberg, Martin, Fredriksson, Simon, Landegren, Ulf, Gallant, Caroline J., Livak, Kenneth J., Genshaft, Alex S., Prakadan, Sanjay, Ziegler, Carly, Hong, Joyce, Regev, Aviv, Shalek, Alexander K
Published 2016

A microfluidic platform enabling single-cell RNA-seq of multigenerational lineages

by Li, Jennifer W., Genshaft, Alex S., de Riba Borrajo, Jacob, Shalek, Alex K., Kimmerling, Robert John, Kazer, Samuel Weisgurt, Payer, Kristofor Robert, Borrajo, Jacob de Riba, Blainey, Paul C, Irvine, Darrell J, Manalis, Scott R, Szeto, Gregory, Shalek, Alexander K
Published 2016

Live cell tagging tracking and isolation for spatial transcriptomics using photoactivatable cell dyes

by Genshaft, Alex S, Ziegler, Carly GK, Tzouanas, Constantine N, Mead, Benjamin E, Jaeger, Alex M, Navia, Andrew W, King, Ryan P, Mana, Miyeko D, Huang, Siyi, Mitsialis, Vanessa, Snapper, Scott B, Yilmaz, Ömer H, Jacks, Tyler, Van Humbeck, Jeffrey F, Shalek, Alex K
Published 2022

Dissecting the multicellular ecosystem of metastatic melanoma by single-cell RNA-seq

by Tirosh, I., Izar, B., Treacy, D., Trombetta, J. J., Rotem, A., Rodman, C., Lian, C., Murphy, G., Fallahi-Sichani, M., Dutton-Regester, K., Lin, J.-R, Cohen, O., Shah, P., Lu, D., Villani, A.-C, Andreev, A. Y., Van Allen, E. M., Bertagnolli, M., Sorger, P. K., Sullivan, R. J., Flaherty, K. T., Frederick, D. T., Jane-Valbuena, J., Rozenblatt-Rosen, O., Prakadan, Sanjay, Wadsworth, Marc Havens, Genshaft, Alex S., Hughes, Travis K., Ziegler, Carly, Kazer, Samuel Weisgurt, Gaillard de Saint Germain, Alethe, Kolb, Kellie Elizabeth, Johannessen, Cory M., Yoon, Clifford H., Shalek, Alexander K, Regev, Aviv, Garraway, Levi A.
Published 2017