Environmental factors determining the epidemiology and population genetic structure of the Bacillus cereus group in the field.

by Ben Raymond, Kelly L Wyres, Samuel K Sheppard, Richard J Ellis, Michael B Bonsall
Published 2010-05-01

WGS Analysis and Interpretation in Clinical and Public Health Microbiology Laboratories: What Are the Requirements and How Do Existing Tools Compare?

by Kelly L. Wyres, Thomas C. Conway, Saurabh Garg, Carlos Queiroz, Matthias Reumann, Kathryn Holt, Laura I. Rusu
Published 2014-06-01

A genomic surveillance framework and genotyping tool for Klebsiella pneumoniae and its related species complex

by Margaret M. C. Lam, Ryan R. Wick, Stephen C. Watts, Louise T. Cerdeira, Kelly L. Wyres, Kathryn E. Holt
Published 2021-07-01

Tracking key virulence loci encoding aerobactin and salmochelin siderophore synthesis in Klebsiella pneumoniae

by Margaret M. C. Lam, Kelly L. Wyres, Louise M. Judd, Ryan R. Wick, Adam Jenney, Sylvain Brisse, Kathryn E. Holt
Published 2018-10-01

Trycycler: consensus long-read assemblies for bacterial genomes

by Ryan R. Wick, Louise M. Judd, Louise T. Cerdeira, Jane Hawkey, Guillaume Méric, Ben Vezina, Kelly L. Wyres, Kathryn E. Holt
Published 2021-09-01

Distinct evolutionary dynamics of horizontal gene transfer in drug resistant and virulent clones of Klebsiella pneumoniae.

by Kelly L Wyres, Ryan R Wick, Louise M Judd, Roni Froumine, Alex Tokolyi, Claire L Gorrie, Margaret M C Lam, Sebastián Duchêne, Adam Jenney, Kathryn E Holt
Published 2019-04-01

Paradoxical Hypersusceptibility of Drug-resistant Mycobacterium tuberculosis to β-lactam Antibiotics

by Keira A. Cohen, Tal El-Hay, Kelly L. Wyres, Omer Weissbrod, Vanisha Munsamy, Chen Yanover, Ranit Aharonov, Oded Shaham, Thomas C. Conway, Yaara Goldschmidt, William R. Bishai, Alexander S. Pym
Published 2016-07-01

Population genomics of hypervirulent Klebsiella pneumoniae clonal-group 23 reveals early emergence and rapid global dissemination

by Margaret M. C. Lam, Kelly L. Wyres, Sebastian Duchêne, Ryan R. Wick, Louise M. Judd, Yunn-Hwen Gan, Chu-Han Hoh, Sophia Archuleta, James S. Molton, Shirin Kalimuddin, Tse Hsien Koh, Virginie Passet, Sylvain Brisse, Kathryn E. Holt
Published 2018-07-01

Genomic surveillance of antimicrobial resistant bacterial colonisation and infection in intensive care patients

by Kelly L. Wyres, Jane Hawkey, Mirianne Mirčeta, Louise M. Judd, Ryan R. Wick, Claire L. Gorrie, Nigel F. Pratt, Jill S. Garlick, Kerrie M. Watson, David V. Pilcher, Steve A. McGloughlin, Iain J. Abbott, Nenad Macesic, Denis W. Spelman, Adam W. J. Jenney, Kathryn E. Holt
Published 2021-07-01

Genomic surveillance for hypervirulence and multi-drug resistance in invasive Klebsiella pneumoniae from South and Southeast Asia

by Kelly L. Wyres, To N. T. Nguyen, Margaret M. C. Lam, Louise M. Judd, Nguyen van Vinh Chau, David A. B. Dance, Margaret Ip, Abhilasha Karkey, Clare L. Ling, Thyl Miliya, Paul N. Newton, Nguyen Phu Huong Lan, Amphone Sengduangphachanh, Paul Turner, Balaji Veeraraghavan, Phat Voong Vinh, Manivanh Vongsouvath, Nicholas R. Thomson, Stephen Baker, Kathryn E. Holt
Published 2020-01-01

Streptococcus pneumoniae carriage prevalence in Nepal: evaluation of a method for delayed transport of samples from remote regions and implications for vaccine implementation.

by Sarah Hanieh, Mainga Hamaluba, Dominic F Kelly, Jane A Metz, Kelly L Wyres, Roberta Fisher, Rahul Pradhan, Disuja Shakya, Lochan Shrestha, Amrita Shrestha, Anip Joshi, Jocelyn Habens, Bishnu D Maharjan, Stephen Thorson, Erik Bohler, Ly-Mee Yu, Sarah Kelly, Emma Plested, Tessa John, Anja M Werno, Neelam Adhikari, David R Murdoch, Angela B Brueggemann, Andrew J Pollard
Published 2014-01-01

Best practice data life cycle approaches for the life sciences [version 2; referees: 2 approved]

by Philippa C. Griffin, Jyoti Khadake, Kate S. LeMay, Suzanna E. Lewis, Sandra Orchard, Andrew Pask, Bernard Pope, Ute Roessner, Keith Russell, Torsten Seemann, Andrew Treloar, Sonika Tyagi, Jeffrey H. Christiansen, Saravanan Dayalan, Simon Gladman, Sandra B. Hangartner, Helen L. Hayden, William W.H. Ho, Gabriel Keeble-Gagnère, Pasi K. Korhonen, Peter Neish, Priscilla R. Prestes, Mark F. Richardson, Nathan S. Watson-Haigh, Kelly L. Wyres, Neil D. Young, Maria Victoria Schneider
Published 2018-06-01