Integrated Genomic Analysis Identifies Clinically Relevant Subtypes of Glioblastoma Characterized by Abnormalities in PDGFRA, IDH1, EGFR, and NF1

by Mesirov, Jill P.
Published 2015

Compression of Structured High-Throughput Sequencing Data

by Campagne, Fabien, Dorff, Kevin C., Chambwe, Nyasha, Robinson, James T., Mesirov, Jill P.
Published 2014

In vivo profiles in malaria are consistent with a novel physiological state

by Wirth, Dyann, Daily, Johanna P., Winzeler, Elizabeth, Mesirov, Jill P., Regev, Aviv
Published 2010

Integrative Genomics Viewer

by Robinson, James T., Thorvaldsdóttir, Helga, Winckler, Wendy, Guttman, Mitchell, Getz, Gad, Mesirov, Jill P., Lander, Eric Steven
Published 2012

Portraits of breast cancer progression

by Alexe, Gabriela, Scanfeld, Daniel, Tamayo, Pablo, Ganesan, Shridar, DeLisi, Charles, Bhanot, Gyan, Dalgin, Gul S., Mesirov, Jill P.
Published 2010

Juicebox Provides a Visualization System for Hi-C Contact Maps with Unlimited Zoom

by Durand, Neva C, Robinson, James T, Shamim, Muhammad S, Machol, Ido, Aiden, Erez Lieberman, Lander, Eric Steven, Mesirov, Jill P.
Published 2016

Prediction of response to therapy with ezatiostat in lower risk myelodysplastic syndrome

by Galili, Naomi, Tamayo, Pablo, Brooks, Margarita R., Brown, Gail, Raza, Azra, Mesirov, Jill P., Botvinnik, Olga B., Brooks, Margarita R.
Published 2012

Molecular adaptations of striatal spiny projection neurons during levodopa-induced dyskinesia

by Heiman, Myriam, Heilbut, Adrian, Francardo, Veronica, Kulicke, Ruth, Fenster, Robert, Kolaczyk, Eric D., Mesirov, Jill P., Surmeier, Dalton J., Cenci, M. Angela, Greengard, Paul
Published 2014

Control of Huntington's Disease-Associated Phenotypes by the Striatum-Enriched Transcription Factor Foxp2

by Carmona, Vitor, Heilbut, Adrian, Sittler, Annie, Pereira de Almeida, Luís, Mesirov, Jill P., Gao, Fan, Kolaczyk, Eric D., Hachigian, Lea, Fenster, Robert, Kulicke, Ruth, Heiman, Myriam
Published 2018

Transcriptional Profiling of Plasmodium falciparum Parasites from Patients with Severe Malaria Identifies Distinct Low vs. High Parasitemic Clusters

by Regev, Aviv, Mesirov, Jill P., Milner, Danny A., Pochet, Nathalie, Krupka, Malkie, Williams, Chris, Seydel, Karl, Taylor, Terrie E., Peer, Yves Van de, Wirth, Dyann, Daily, Johanna P.
Published 2012

MicroSCALE Screening Reveals Genetic Modifiers of Therapeutic Response in Melanoma

by Wood, Kris C., Konieczkowski, David J., Johannessen, Cory M., Boehm, Jesse S., Tamayo, Pablo, Botvinnik, Olga B., Mesirov, Jill P., Hahn, William C., Root, David E., Garraway, Levi A., Sabatini, David
Published 2014

GenePattern flow cytometry suite

by Spidlen, Josef, Barsky, Aaron, Breuer, Karin, Carr, Peter, Nazaire, Marc-Danie, Hill, Barbara, Qian, Yu, Liefeld, Ted, Reich, Michael, Wilkinson, Peter, Scheuermann, Richard H., Sekaly, Rafick-Pierre, Brinkman, Ryan R., Mesirov, Jill P.
Published 2013

Automated high-dimensional flow cytometric data analysis

by Pyne, Saumyadipta, Hu, Xinli, Wang, Kui, Rossin, Elizabeth, Lin, Tsung-I, Maier, Lisa M., Baecher-Allan, Clare, McLachlan, Geoffrey J., Tamayo, Pablo, Hafler, David A., De Jager, Philip L., Mesirov, Jill P.
Published 2010

MYC regulation of a "poor-prognosis" metastatic cancer cell state

by Mesirov, Jill P., Wolfer, Anita, Wittner, Ben S., Irimia, Daniel, Flavin, Richard J., Lupien, Mathieu, Gunawardane, Ruwanthi N., Meyer, Clifford A., Lightcap, Eric S., Tamayo, Pablo, Liu, X. Shirley, Shioda, Toshi, Toner, Mehmet, Loda, Massimo, Brown, Myles, Brugge, Joan S., Ramaswamy, Sridhar
Published 2014

Cancer Vulnerabilities Unveiled by Genomic Loss

by Nijhawan, Deepak, Zack, Travis I, Ren, Yin, Strickland, Matthew R, Lamothe, Rebecca, Schumacher, Steven E, Tsherniak, Aviad, Besche, Henrike C, Rosenbluh, Joseph, Shehata, Shyemaa, Cowley, Glenn S., Weir, Barbara A, Goldberg, Alfred L, Mesirov, Jill P., Root, David E, Beroukhim, Rameen, Hahn, William C., Bhatia, Sangeeta N
Published 2014

Targeted Tumor-Penetrating siRNA Nanocomplexes for Credentialing the Ovarian Cancer Target ID4

by Ren, Yin, von Maltzhan, Geoffrey, Agrawal, Amit, Mesirov, Jill P., Lo, Justin H., Cheung, Hiu Wing, Cowley, Glenn S., Weir, Barbara A., Boehm, Jesse S., Tamayo, Pablo, Karst, Alison M., Liu, Joyce F., Hirsch, Michelle S., Drapkin, Ronny, Root, David E., Fogal, Valentina, Ruoslahti, Erkki, Hahn, William C., Bhatia, Sangeeta N
Published 2014

Integrative genomic analysis by interoperation of bioinformatics tools in GenomeSpace

by Qu, Kun, Garamszegi, Sara, Wu, Felix, Thorvaldsdottir, Helga, Liefeld, Ted, Ocana, Marco, Pochet, Nathalie, Robinson, James T, Demchak, Barry, Hull, Tim, Ben-Artzi, Gil, Blankenberg, Daniel, Barber, Galt P, Lee, Brian T, Kuhn, Robert M, Nekrutenko, Anton, Segal, Eran, Ideker, Trey, Reich, Michael, Chang, Howard Y, Mesirov, Jill P, Borges-Rivera, Diego Ramon, Regev, Aviv
Published 2016

DiSCoVERing Innovative Therapies for Rare Tumors: Combining Genetically Accurate Disease Models with In Silico Analysis to Identify Novel Therapeutic Targets

by Hanaford, A. R., Price, A., Kahlert, U. D., Maciaczyk, J., Nikkhah, G., Dancik, V., Seashore-Ludlow, B., Viswanathan, V., Rees, M. G., Eberhart, C. G., Raabe, E. H., Archer, Tenley, Kim, Jong Wook, Ehrenberger, Tobias, Clemons, Paul A, Stewart, Michelle L., Shamji, Alykhan, Fraenkel, Ernest, Pomeroy, Scott L., Tamayo, Pablo, Schreiber, Stuart L., Mesirov, Jill P.
Published 2018

Systematic investigation of genetic vulnerabilities across cancer cell lines reveals lineage-specific dependencies in ovarian cancer

by Ren, Yin, Meyerson, Matthew L., Drapkin, Ronny, Cheung, Hiu Wing, Cowley, Glenn S., Weir, Barbara A., Boehm, Jesse S., Rusin, Scott, Scott, Justine A., East, Alexandra, Ali, Levi D., Lizotte, Patrick H., Wong, Terence C., Jiang, Guozhi, Hsiao, Jessica, Mermel, Craig H., Getz, Gad, Barretina, Jordi, Gopal, Shuba, Tamayo, Pablo, Gould, Joshua, Tsherniak, Aviad, Stransky, Nicolas, Luo, Biao, Mesirov, Jill P., Garraway, Levi A., Lander, Eric S., Root, David E., Hahn, William C., Bhatia, Sangeeta N
Published 2012