Local epigenomic state cannot discriminate interacting and non-interacting enhancer-promoter pairs with high accuracy.

by Wang Xi, Michael A Beer
Published 2018-12-01

Loop competition and extrusion model predicts CTCF interaction specificity

by Wang Xi, Michael A. Beer
Published 2021-02-01

Identification of Predictive Cis-Regulatory Elements Using a Discriminative Objective Function and a Dynamic Search Space.

by Rahul Karnik, Michael A Beer
Published 2015-01-01

Group normalization for genomic data.

by Mahmoud Ghandi, Michael A Beer
Published 2012-01-01

Embryonic loss of human females with partial trisomy 19 identifies region critical for the single active X.

by Barbara R Migeon, Michael A Beer, Hans T Bjornsson
Published 2017-01-01

Enhanced regulatory sequence prediction using gapped k-mer features.

by Mahmoud Ghandi, Dongwon Lee, Morteza Mohammad-Noori, Michael A Beer
Published 2014-07-01

Epigenomic landscapes of retinal rods and cones

by Alisa Mo, Chongyuan Luo, Fred P Davis, Eran A Mukamel, Gilbert L Henry, Joseph R Nery, Mark A Urich, Serge Picard, Ryan Lister, Sean R Eddy, Michael A Beer, Joseph R Ecker, Jeremy Nathans
Published 2016-03-01