Worlds Apart – Transcriptome Profiles of Key Oral Microbes in the Periodontal Pocket Compared to Single Laboratory Culture Reflect Synergistic Interactions

by Zhi-Luo Deng, Helena Sztajer, Michael Jarek, Sabin Bhuju, Irene Wagner-Döbler
Published 2018-02-01

Dysbiosis in chronic periodontitis: Key microbial players and interactions with the human host

by Zhi-Luo Deng, Szymon P. Szafrański, Michael Jarek, Sabin Bhuju, Irene Wagner-Döbler
Published 2017-06-01

From human monocytes to genome-wide binding sites--a protocol for small amounts of blood: monocyte isolation/ChIP-protocol/library amplification/genome wide computational data anal...

by Sebastian Weiterer, Florian Uhle, Sabin Bhuju, Michael Jarek, Markus A Weigand, Marek Bartkuhn
Published 2014-01-01

Transcriptomic Analysis Reveals Selective Metabolic Adaptation of Streptococcus suis to Porcine Blood and Cerebrospinal Fluid

by Anna Koczula, Michael Jarek, Christian Visscher, Peter Valentin-Weigand, Ralph Goethe, Jörg Willenborg
Published 2017-02-01

Critical Role of Zur and SmtB in Zinc Homeostasis of Mycobacterium smegmatis

by Elke Goethe, Kristin Laarmann, Janita Lührs, Michael Jarek, Jochen Meens, Astrid Lewin, Ralph Goethe
Published 2020-04-01

Transcriptomic profiling of Yersinia pseudotuberculosis reveals reprogramming of the Crp regulon by temperature and uncovers Crp as a master regulator of small RNAs.

by Aaron M Nuss, Ann Kathrin Heroven, Barbara Waldmann, Jan Reinkensmeier, Michael Jarek, Michael Beckstette, Petra Dersch
Published 2015-03-01

Filling the Gaps in the Cyanobacterial Tree of Life—Metagenome Analysis of <i>Stigonema ocellatum</i> DSM 106950, <i>Chlorogloea purpurea</i> SAG 13.99 and <i>Gomphosphaeria aponin...

by Pia Marter, Sixing Huang, Henner Brinkmann, Silke Pradella, Michael Jarek, Manfred Rohde, Boyke Bunk, Jörn Petersen
Published 2021-03-01

Divergent co-transcriptomes of different host cells infected with Toxoplasma gondii reveal cell type-specific host-parasite interactions

by Izabela J. Swierzy, Ulrike Händel, Alexander Kaever, Michael Jarek, Maren Scharfe, Dirk Schlüter, Carsten G. K. Lüder
Published 2017-08-01

Sepsis induces specific changes in histone modification patterns in human monocytes.

by Sebastian Weiterer, Florian Uhle, Christoph Lichtenstern, Benedikt H Siegler, Sabin Bhuju, Michael Jarek, Marek Bartkuhn, Markus A Weigand
Published 2015-01-01

LINT, a novel dL(3)mbt-containing complex, represses malignant brain tumour signature genes.

by Karin Meier, Eve-Lyne Mathieu, Florian Finkernagel, L Maximilian Reuter, Maren Scharfe, Gunther Doehlemann, Michael Jarek, Alexander Brehm
Published 2012-01-01

Complete Genome Sequencing of <i>Leptospira interrogans</i> Isolates from Malaysia Reveals Massive Genome Rearrangement but High Conservation of Virulence-Associated Genes

by Siti Roszilawati Ramli, Boyke Bunk, Cathrin Spröer, Robert Geffers, Michael Jarek, Sabin Bhuju, Marga Goris, Sahlawati Mustakim, Frank Pessler
Published 2021-09-01

Genomewide analyses define different modes of transcriptional regulation by peroxisome proliferator-activated receptor-β/δ (PPARβ/δ).

by Till Adhikary, Kerstin Kaddatz, Florian Finkernagel, Anne Schönbauer, Wolfgang Meissner, Maren Scharfe, Michael Jarek, Helmut Blöcker, Sabine Müller-Brüsselbach, Rolf Müller
Published 2011-01-01

Characterization of the p53 cistrome--DNA binding cooperativity dissects p53's tumor suppressor functions.

by Katharina Schlereth, Charlotte Heyl, Anna-Maria Krampitz, Marco Mernberger, Florian Finkernagel, Maren Scharfe, Michael Jarek, Ellen Leich, Andreas Rosenwald, Thorsten Stiewe
Published 2013-01-01

Genomic Analysis and Isolation of RNA Polymerase II Dependent Promoters from Spodoptera frugiperda.

by Maren Bleckmann, Markus H-Y Fritz, Sabin Bhuju, Michael Jarek, Margitta Schürig, Robert Geffers, Vladimir Benes, Hüseyin Besir, Joop van den Heuvel
Published 2015-01-01

Amphibian gut microbiota shifts differentially in community structure but converges on habitat-specific predicted functions

by Molly C. Bletz, Daniel J. Goedbloed, Eugenia Sanchez, Timm Reinhardt, Christoph C. Tebbe, Sabin Bhuju, Robert Geffers, Michael Jarek, Miguel Vences, Sebastian Steinfartz
Published 2016-12-01

Donor-derived IL-17A and IL-17F deficiency triggers Th1 allo-responses and increases gut leakage during acute GVHD.

by Ivan Odak, Alina Depkat-Jakob, Maleen Beck, Michael Jarek, Yan Yu, Ursula Seidler, Sascha David, Arnold Ganser, Reinhold Förster, Immo Prinz, Christian Koenecke
Published 2020-01-01

A functional insulator screen identifies NURF and dREAM components to be required for enhancer-blocking.

by Dorte Bohla, Martin Herold, Imke Panzer, Melanie K Buxa, Tamer Ali, Jeroen Demmers, Marcus Krüger, Maren Scharfe, Michael Jarek, Marek Bartkuhn, Rainer Renkawitz
Published 2014-01-01

A Genomic Approach to Resolving Relapse versus Reinfection among Four Cases of Buruli Ulcer.

by Miriam Eddyani, Koen Vandelannoote, Conor J Meehan, Sabin Bhuju, Jessica L Porter, Julia Aguiar, Torsten Seemann, Michael Jarek, Mahavir Singh, Françoise Portaels, Timothy P Stinear, Bouke C de Jong
Published 2015-11-01

A Novel Mechanism of Host-Pathogen Interaction through sRNA in Bacterial Outer Membrane Vesicles.

by Katja Koeppen, Thomas H Hampton, Michael Jarek, Maren Scharfe, Scott A Gerber, Daniel W Mielcarz, Elora G Demers, Emily L Dolben, John H Hammond, Deborah A Hogan, Bruce A Stanton
Published 2016-06-01

The Biofilm Inhibitor Carolacton Enters Gram-Negative Cells: Studies Using a TolC-Deficient Strain of Escherichia coli

by Jannik Donner, Michael Reck, Boyke Bunk, Michael Jarek, Constantin Benjamin App, Jan P. Meier-Kolthoff, Jorg Overmann, Rolf Muller, Andreas Kirschning, Irene Wagner-Dobler, Patricia A. Bradford, Bernd Kreikemeyer, Indranil Biswas, Rajeev Misra
Published 2017-09-01