Evidence for large domains of similarly expressed genes in the <it>Drosophila </it> genome

by Rubin Gerald M, Spellman Paul T
Published 2002-06-01

GenomeGraphs: integrated genomic data visualization with R

by Spellman Paul T, Bullard James, Durinck Steffen, Dudoit Sandrine
Published 2009-01-01

Morphometic analysis of TCGA glioblastoma multiforme

by Chang Hang, Fontenay Gerald V, Han Ju, Cong Ge, Baehner Frederick L, Gray Joe W, Spellman Paul T, Parvin Bahram
Published 2011-12-01

Integrating biological knowledge into variable selection: an empirical Bayes approach with an application in cancer biology

by Hill Steven M, Neve Richard M, Bayani Nora, Kuo Wen-Lin, Ziyad Safiyyah, Spellman Paul T, Gray Joe W, Mukherjee Sach
Published 2012-05-01

Prediction of epigenetically regulated genes in breast cancer cell lines

by Lu Yontao, Moorhead Martin, Carlton Victoria EH, Flaucher Diane, Nautiyal Shivani, Durinck Steffen, Sadanandam Anguraj, Loss Leandro A, Gray Joe W, Faham Malek, Spellman Paul, Parvin Bahram
Published 2010-06-01

High quality copy number and genotype data from FFPE samples using Molecular Inversion Probe (MIP) microarrays

by Wang, Yuker, Carlton, Victoria, Karlin-Neumann, George, Sapolsky, Ronald, Zhang, Li, Moorhead, Martin, Wang, Zhigang, Richardson, Andrea, Warren, Robert, Walther, Axel, Bondy, Melissa, Sahin, Aysegul, Krahe, Ralf, Tuna, Musaffe, Thompson, Patricia, Spellman, Paul, Gray, Joe, Mills, Gordon, Faham, Malek
Published 2009

A systems analysis of the chemosensitivity of breast cancer cells to the polyamine analogue PG-11047

by Feiler Heidi S, Bayani Nora, Wang Nicholas J, Hu Zhi, Fontenay Gerald V, Sadanandam Anguraj, Heiser Laura M, Gibb William J, Bhattacharya Sanchita, Ziyad Safiyyah, Das Debopriya, Kuo Wen-Lin, Neve Richard M, Wyrobek Andrew J, Spellman Paul T, Marton Laurence J, Gray Joe W
Published 2009-12-01

Ovarian carcinomas with genetic and epigenetic BRCA1 loss have distinct molecular abnormalities

by Miller Dianne M, Wang Yuker, Spellman Paul T, Smith Margaret, Blood Katherine A, Kalloger Steve E, Kaurah Pardeep, Ridge Yolanda, Troussard Armelle, Young Sean, Boyd Niki, De Luca Alessandro, Press Joshua Z, Horsman Doug, Faham Malek, Gilks C Blake, Gray Joe, Huntsman David G
Published 2008-01-01

High quality copy number and genotype data from FFPE samples using Molecular Inversion Probe (MIP) microarrays

by Bondy Melissa, Walther Axel, Warren Robert, Richardson Andrea L, Wang Zhigang C, Moorhead Martin, Zhang Li, Sapolsky Ronald, Karlin-Neumann George, Carlton Victoria EH, Wang Yuker, Sahin Aysegul, Krahe Ralf, Tuna Musaffe, Thompson Patricia A, Spellman Paul T, Gray Joe W, Mills Gordon B, Faham Malek
Published 2009-02-01

A simple spreadsheet-based, MIAME-supportive format for microarray data: MAGE-TAB

by White Joseph, Stoeckert Christian J, Sherlock Gavin, Quackenbush John, Petersen Kjell, Miller Michael, Maier Donald S, Liu Junmin, Irizarry Rafael A, Holloway Ele, Farne Anna, Causton Helen C, Spellman Paul T, Rocca-Serra Philippe, Rayner Tim F, Whetzel Patricia L, Wymore Farrell, Parkinson Helen, Sarkans Ugis, Ball Catherine A, Brazma Alvis
Published 2006-11-01