Treelength optimization for phylogeny estimation.

by Kevin Liu, Tandy Warnow
Published 2012-01-01

Unblended disjoint tree merging using GTM improves species tree estimation

by Vladimir Smirnov, Tandy Warnow
Published 2020-04-01

SIESTA: enhancing searches for optimal supertrees and species trees

by Pranjal Vachaspati, Tandy Warnow
Published 2018-05-01

Scaling statistical multiple sequence alignment to large datasets

by Michael Nute, Tandy Warnow
Published 2016-11-01

Statistically consistent divide-and-conquer pipelines for phylogeny estimation using NJMerge

by Erin K. Molloy, Tandy Warnow
Published 2019-07-01

Gene tree parsimony for incomplete gene trees: addressing true biological loss

by Md Shamsuzzoha Bayzid, Tandy Warnow
Published 2018-01-01

Constrained incremental tree building: new absolute fast converging phylogeny estimation methods with improved scalability and accuracy

by Qiuyi Zhang, Satish Rao, Tandy Warnow
Published 2019-02-01

Disjoint Tree Mergers for Large-Scale Maximum Likelihood Tree Estimation

by Minhyuk Park, Paul Zaharias, Tandy Warnow
Published 2021-05-01

RAxML and FastTree: comparing two methods for large-scale maximum likelihood phylogeny estimation.

by Kevin Liu, C Randal Linder, Tandy Warnow
Published 2011-01-01

Correction to: The performance of coalescent-based species tree estimation methods under models of missing data

by Michael Nute, Jed Chou, Erin K. Molloy, Tandy Warnow
Published 2020-02-01

The performance of coalescent-based species tree estimation methods under models of missing data

by Michael Nute, Jed Chou, Erin K. Molloy, Tandy Warnow
Published 2018-05-01

OCTAL: Optimal Completion of gene trees in polynomial time

by Sarah Christensen, Erin K. Molloy, Pranjal Vachaspati, Tandy Warnow
Published 2018-03-01

HIPPI: highly accurate protein family classification with ensembles of HMMs

by Nam-phuong Nguyen, Michael Nute, Siavash Mirarab, Tandy Warnow
Published 2016-11-01

Weighted Statistical Binning: Enabling Statistically Consistent Genome-Scale Phylogenetic Analyses.

by Md Shamsuzzoha Bayzid, Siavash Mirarab, Bastien Boussau, Tandy Warnow
Published 2015-01-01

Non-parametric correction of estimated gene trees using TRACTION

by Sarah Christensen, Erin K. Molloy, Pranjal Vachaspati, Ananya Yammanuru, Tandy Warnow
Published 2020-01-01

Using Robinson-Foulds supertrees in divide-and-conquer phylogeny estimation

by Xilin Yu, Thien Le, Sarah A. Christensen, Erin K. Molloy, Tandy Warnow
Published 2021-06-01

The development and application of bioinformatics core competencies to improve bioinformatics training and education.

by Nicola Mulder, Russell Schwartz, Michelle D Brazas, Cath Brooksbank, Bruno Gaeta, Sarah L Morgan, Mark A Pauley, Anne Rosenwald, Gabriella Rustici, Michael Sierk, Tandy Warnow, Lonnie Welch
Published 2018-02-01

Applying, Evaluating and Refining Bioinformatics Core Competencies (An Update from the Curriculum Task Force of ISCB's Education Committee).

by Lonnie Welch, Cath Brooksbank, Russell Schwartz, Sarah L Morgan, Bruno Gaeta, Alastair M Kilpatrick, Daniel Mietchen, Benjamin L Moore, Nicola Mulder, Mark Pauley, William Pearson, Predrag Radivojac, Naomi Rosenberg, Anne Rosenwald, Gabriella Rustici, Tandy Warnow
Published 2016-05-01