Integrative Analyses of Human Reprogramming Reveal Dynamic Nature of Induced Pluripotency

by Cacchiarelli, Davide, Trapnell, Cole, Ziller, Michael J, Soumillon, Magali, Cesana, Marcella, Karnik, Rahul, Donaghey, Julie, Smith, Zachary D, Ratanasirintrawoot, Sutheera, Zhang, Xiaolan, Ho Sui, Shannan J, Wu, Zhaoting, Akopian, Veronika, Gifford, Casey A, Doench, John, Rinn, John L, Daley, George Q, Meissner, Alexander, Mikkelsen, Tarjei S, Lander, Eric Steven
Published 2017

Locally Disordered Methylation Forms the Basis of Intratumor Methylome Variation in Chronic Lymphocytic Leukemia

by Landau, Dan A, Clement, Kendell, Ziller, Michael J, Boyle, Patrick, Fan, Jean, Gu, Hongcang, Stevenson, Kristen, Sougnez, Carrie, Wang, Lili, Li, Shuqiang, Kotliar, Dylan, Zhang, Wandi, Ghandi, Mahmoud, Garraway, Levi, Fernandes, Stacey M, Livak, Kenneth J, Gabriel, Stacey, Gnirke, Andreas, Brown, Jennifer R, Neuberg, Donna, Kharchenko, Peter V, Hacohen, Nir, Getz, Gad, Meissner, Alexander, Wu, Catherine J, Lander, Eric Steven
Published 2017

Transcriptional and Epigenetic Dynamics during Specification of Human Embryonic Stem Cells

by Gifford, Casey A, Ziller, Michael J, Gu, Hongcang, Trapnell, Cole, Donaghey, Julie, Tsankov, Alexander, Shalek, Alex K., Kelley, David R, Shishkin, Alexander A, Issner, Robbyn, Zhang, Xiaolan, Coyne, Michael J., Fostel, Jennifer L., Holmes, Laurie, Meldrim, James C., Guttman, Mitchell, Epstein, Charles B., Park, Hongkun, Kohlbacher, Oliver, Rinn, John L., Gnirke, Andreas, Bernstein, Bradley E., Meissner, Alexander, Lander, Eric Steven
Published 2014