How to Regulate a Gene: To Repress or to Activate?

by van Oudenaarden, Alexander, van Oudenaarden, Alexander, Slavov, Nikolai G
Published 2015

Identifying the Stem Cell of the Intestinal Crypt: Strategies and Pitfalls

by Barker, Nick, van Oudenaarden, Alexander, Clevers, Hans, van Oudenaarden, Alexander
Published 2014

Cellular Decision Making and Biological Noise: From Microbes to Mammals

by Balazsi, Gabor, van Oudenaarden, Alexander, Collins, James J., van Oudenaarden, Alexander
Published 2015

When Noisy Neighbors Are a Blessing: Analysis of Gene Expression Noise Identifies Coregulated Genes

by Junker, Jan Philipp, van Oudenaarden, Alexander, Junker, Jan Philipp, van Oudenaarden, Alexander
Published 2014

Growth landscape formed by perception and import of glucose in yeast

by Youk, Hyun, van Oudenaarden, Alexander
Published 2013

Synthetic biology: Understanding biological design from synthetic circuits

by Mukherji, Shankar, van Oudenaarden, Alexander
Published 2013

Single-Molecule Approaches to Stochastic Gene Expression

by Raj, Arjun, van Oudenaarden, Alexander
Published 2013

Validating Transcripts with Probes and Imaging Technology

by Itzkovitz, Shaul Shalev, van Oudenaarden, Alexander
Published 2012

Transcript counting in single cells reveals dynamics of rDNA transcription

by Tan, Rui Zhen, van Oudenaarden, Alexander
Published 2011

Genome-wide dissection of microRNA functions and cotargeting networks using gene-set signatures

by Tsang, John S., Ebert, Margaret S., van Oudenaarden, Alexander
Published 2013

Caenorhabditis elegans aristaless/Arx gene alr-1 restricts variable gene expression

by Topalidou, Irini, van Oudenaarden, Alexander, Chalfie, Martin
Published 2011

Optimality in the Development of Intestinal Crypts

by Itzkovitz, Shaul Shalev, Blat, Irene C., Clevers, Hans, van Oudenaarden, Alexander, Jacks, Tyler E., van Oudenaarden, Alexander
Published 2014

FuseFISH: Robust Detection of Transcribed Gene Fusions in Single Cells

by Semrau, Stefan, Crosetto, Nicola, Bienko, Magda, Boni, Marina, Bernasconi, Paolo, Chiarle, Roberto, van Oudenaarden, Alexander, van Oudenaarden, Alexander
Published 2016

Single-Cell Analysis Reveals that Noncoding RNAs Contribute to Clonal Heterogeneity by Modulating Transcription Factor Recruitment

by Bumgarner, Stacie L., Neuert, Gregor, Voight, Benjamin F, Symbor-Nagrabska, Anna, Grisafi, Paula, van Oudenaarden, Alexander, Fink, Gerald R., van Oudenaarden, Alexander
Published 2014

A Caenorhabditis elegans protein with a PRDM9-like SET domain localizes to chromatin-associated foci and promotes spermatocyte gene expression, sperm production and fertility

by Engert, Christoph, Droste, Rita, van Oudenaarden, Alexander, Horvitz, Howard Robert
Published 2018

Highly expressed loci are vulnerable to misleading ChIP localization of multiple unrelated proteins

by Teytelman, Leonid, Thurtle, Deborah M., Rine, Jasper, van Oudenaarden, Alexander
Published 2014

Variability in gene expression underlies incomplete penetrance

by van Oudenaarden, Alexander, Rifkin, Scott A., Raj, Arjun, Andersen, Erik C.
Published 2013

A Conserved Cell Growth Cycle Can Account for the Environmental Stress Responses of Divergent Eukaryotes

by Airoldi, Edoardo M., van Oudenaarden, Alexander, Botstein, David, Slavov, Nikolai G
Published 2012

A systems-level analysis of perfect adaptation in yeast osmoregulation

by Muzzey, Dale, Gomez-Uribe, Carlos A., Mettetal, Jerome T., van Oudenaarden, Alexander
Published 2013

Single-Cell Expression Analyses during Cellular Reprogramming Reveal an Early Stochastic and a Late Hierarchic Phase

by Buganim, Yosef, Faddah, Dina A., Itskovich, Elena, Markoulaki, Styliani, Ganz, Kibibi, van Oudenaarden, Alexander, Jaenisch, Rudolf, Klemm, Sandy Lee, van Oudenaarden, Alexander, Cheng, Albert Wu
Published 2014