Identifying CDKN3 Gene Expression as a Prognostic Biomarker in Lung Adenocarcinoma via Meta-analysis

Lung cancer is among the major causes of cancer deaths, and the survival rate of lung cancer patients is extremely low. Recent studies have demonstrated that the gene CDKN3 is related to neoplasia, but in the literature severe controversy exists over whether it is involved in cancer progression or,...

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Main Authors: Xiao Zang, Min Chen, Yunyun Zhou, Guanghua Xiao, Yang Xie, Xinlei Wang
Format: Article
Language:English
Published: SAGE Publishing 2015-01-01
Series:Cancer Informatics
Online Access:https://doi.org/10.4137/CIN.S17287
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spelling doaj-146157c450fc4322a097ddceef44d1182020-11-25T03:02:47ZengSAGE PublishingCancer Informatics1176-93512015-01-0114s210.4137/CIN.S17287Identifying CDKN3 Gene Expression as a Prognostic Biomarker in Lung Adenocarcinoma via Meta-analysisXiao Zang0Min Chen1Yunyun Zhou2Guanghua Xiao3Yang Xie4Xinlei Wang5Quantitative Biomedical Research Center, Department of Clinical Sciences.Department of Mathematical Sciences, University of Texas at DallasSimmons Comprehensive Cancer Center, University of Texas Southwestern Medical Center.Simmons Comprehensive Cancer Center, University of Texas Southwestern Medical Center.Simmons Comprehensive Cancer Center, University of Texas Southwestern Medical Center.Department of Statistics, Southern Methodist University.Lung cancer is among the major causes of cancer deaths, and the survival rate of lung cancer patients is extremely low. Recent studies have demonstrated that the gene CDKN3 is related to neoplasia, but in the literature severe controversy exists over whether it is involved in cancer progression or, conversely, tumor inhibition. In this study, we investigated the expression of CDKN3 and its association with prognosis in lung adenocarcinoma (ADC) and squamous cell carcinoma (SCC) using datasets in Lung Cancer Explorer (LCE; http://qbrc.swmed.edu/lce/ ). We found that CDKN3 was up-regulated in ADC and SCC compared to normal tissues. We also found that CDKN3 was expressed at a higher level in SCC than in ADC, which was further validated through meta-analysis (coefficient = 2.09, 95% CI = 1.50–2.67, P < 0.0001). In addition, based on meta-analysis for the prognostic value of CDKN3, we found that higher CDKN3 expression was associated with poorer survival outcomes in ADC (HR = 1.65, 95% CI = 1.39–1.96, P < 0.0001), but not in SCC (HR = 1.10, 95% CI = 0.84–1.44, P = 0.494). Our findings indicate that CDKN3 maybe a prognostic marker in ADC, though the detailed mechanism is yet to be revealed.https://doi.org/10.4137/CIN.S17287
collection DOAJ
language English
format Article
sources DOAJ
author Xiao Zang
Min Chen
Yunyun Zhou
Guanghua Xiao
Yang Xie
Xinlei Wang
spellingShingle Xiao Zang
Min Chen
Yunyun Zhou
Guanghua Xiao
Yang Xie
Xinlei Wang
Identifying CDKN3 Gene Expression as a Prognostic Biomarker in Lung Adenocarcinoma via Meta-analysis
Cancer Informatics
author_facet Xiao Zang
Min Chen
Yunyun Zhou
Guanghua Xiao
Yang Xie
Xinlei Wang
author_sort Xiao Zang
title Identifying CDKN3 Gene Expression as a Prognostic Biomarker in Lung Adenocarcinoma via Meta-analysis
title_short Identifying CDKN3 Gene Expression as a Prognostic Biomarker in Lung Adenocarcinoma via Meta-analysis
title_full Identifying CDKN3 Gene Expression as a Prognostic Biomarker in Lung Adenocarcinoma via Meta-analysis
title_fullStr Identifying CDKN3 Gene Expression as a Prognostic Biomarker in Lung Adenocarcinoma via Meta-analysis
title_full_unstemmed Identifying CDKN3 Gene Expression as a Prognostic Biomarker in Lung Adenocarcinoma via Meta-analysis
title_sort identifying cdkn3 gene expression as a prognostic biomarker in lung adenocarcinoma via meta-analysis
publisher SAGE Publishing
series Cancer Informatics
issn 1176-9351
publishDate 2015-01-01
description Lung cancer is among the major causes of cancer deaths, and the survival rate of lung cancer patients is extremely low. Recent studies have demonstrated that the gene CDKN3 is related to neoplasia, but in the literature severe controversy exists over whether it is involved in cancer progression or, conversely, tumor inhibition. In this study, we investigated the expression of CDKN3 and its association with prognosis in lung adenocarcinoma (ADC) and squamous cell carcinoma (SCC) using datasets in Lung Cancer Explorer (LCE; http://qbrc.swmed.edu/lce/ ). We found that CDKN3 was up-regulated in ADC and SCC compared to normal tissues. We also found that CDKN3 was expressed at a higher level in SCC than in ADC, which was further validated through meta-analysis (coefficient = 2.09, 95% CI = 1.50–2.67, P < 0.0001). In addition, based on meta-analysis for the prognostic value of CDKN3, we found that higher CDKN3 expression was associated with poorer survival outcomes in ADC (HR = 1.65, 95% CI = 1.39–1.96, P < 0.0001), but not in SCC (HR = 1.10, 95% CI = 0.84–1.44, P = 0.494). Our findings indicate that CDKN3 maybe a prognostic marker in ADC, though the detailed mechanism is yet to be revealed.
url https://doi.org/10.4137/CIN.S17287
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