Community Assembly Processes as a Mechanistic Explanation of the Predator-Prey Diversity Relationship in Marine Microbes

Predator and prey α-diversities are often positively associated; yet, understandings of the underlying mechanisms require manipulative experiments and thus remain unclear. We attempt to address this issue by deciphering how α-diversity of predator and prey influences each other’s community assembly...

Full description

Bibliographic Details
Main Authors: Feng-Hsun Chang, Jinny Wu Yang, Ariana Chih-Hsien Liu, Hsiao-Pei Lu, Gwo-Ching Gong, Fuh-Kwo Shiah, Chih-hao Hsieh
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-05-01
Series:Frontiers in Marine Science
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fmars.2021.651565/full
id doaj-15459f30cbe04c1fa274f4c3d7f02435
record_format Article
spelling doaj-15459f30cbe04c1fa274f4c3d7f024352021-05-31T07:45:22ZengFrontiers Media S.A.Frontiers in Marine Science2296-77452021-05-01810.3389/fmars.2021.651565651565Community Assembly Processes as a Mechanistic Explanation of the Predator-Prey Diversity Relationship in Marine MicrobesFeng-Hsun Chang0Jinny Wu Yang1Ariana Chih-Hsien Liu2Hsiao-Pei Lu3Gwo-Ching Gong4Gwo-Ching Gong5Fuh-Kwo Shiah6Fuh-Kwo Shiah7Fuh-Kwo Shiah8Chih-hao Hsieh9Chih-hao Hsieh10Chih-hao Hsieh11Chih-hao Hsieh12Institute of Oceanography, National Taiwan University, Taipei, TaiwanEcology and Evolutionary Biology, University of Michigan, Ann Arbor, MI, United StatesInstitute of Oceanography, National Taiwan University, Taipei, TaiwanDepartment of Biotechnology and Bioindustry Sciences, National Cheng Kung University, Tainan, TaiwanInstitute of Marine Environment and Ecology, National Taiwan Ocean University, Keelung, TaiwanCenter of Excellence for the Oceans, National Taiwan Ocean University, Keelung, TaiwanInstitute of Oceanography, National Taiwan University, Taipei, TaiwanInstitute of Marine Environment and Ecology, National Taiwan Ocean University, Keelung, TaiwanResearch Center for Environmental Changes, Academia Sinica, Taipei, TaiwanInstitute of Oceanography, National Taiwan University, Taipei, TaiwanResearch Center for Environmental Changes, Academia Sinica, Taipei, TaiwanInstitute of Ecology and Evolutionary Biology and Department of Life Science, National Taiwan University, Taipei, TaiwanNational Center for Theoretical Sciences, Taipei, TaiwanPredator and prey α-diversities are often positively associated; yet, understandings of the underlying mechanisms require manipulative experiments and thus remain unclear. We attempt to address this issue by deciphering how α-diversity of predator and prey influences each other’s community assembly processes, which subsequently determine their α-diversity. The occurrence of assembly processes was indicated by the mean pairwise taxonomic index within a community (αMPTI), assuming assembly processes left traceable imprints on species’ phylogeny. Specifically, αMPTI quantifies deviations of observed phylogenetic distances from that of random, so that it can be used to hint at the occurrence of non-random/deterministic assembly processes. Larger αMPTI of a community implies the occurrence of weaker homogenizing deterministic assembly processes, which suggests that this community might be comprised of less similar species and thus has higher α-diversity. We hypothesize that higher predator and prey α-diversity would be positively associated with each other’s αMPTI, which would then be positively associated with their α-diversity. To test the hypothesis, we calculated Shannon diversity and αMPTI for heterotrophic nanoflagellates (HNF; predator) and bacteria (prey) communities in the East China Sea (ECS). The HNF Shannon diversity was found to be positively associated with αMPTI of bacteria, which was then positively associated with bacterial Shannon diversity. In contrast, bacterial Shannon diversity did not correlate with HNF’s αMPTI. We argue that top-down control is one of the explanations to the positive α-diversity association among trophic levels in microbes of the ECS.https://www.frontiersin.org/articles/10.3389/fmars.2021.651565/fullbiodiversitycommunity assembly processeshomogeneous versus heterogeneous selectionpredator-prey diversity relationshipphylogeny
collection DOAJ
language English
format Article
sources DOAJ
author Feng-Hsun Chang
Jinny Wu Yang
Ariana Chih-Hsien Liu
Hsiao-Pei Lu
Gwo-Ching Gong
Gwo-Ching Gong
Fuh-Kwo Shiah
Fuh-Kwo Shiah
Fuh-Kwo Shiah
Chih-hao Hsieh
Chih-hao Hsieh
Chih-hao Hsieh
Chih-hao Hsieh
spellingShingle Feng-Hsun Chang
Jinny Wu Yang
Ariana Chih-Hsien Liu
Hsiao-Pei Lu
Gwo-Ching Gong
Gwo-Ching Gong
Fuh-Kwo Shiah
Fuh-Kwo Shiah
Fuh-Kwo Shiah
Chih-hao Hsieh
Chih-hao Hsieh
Chih-hao Hsieh
Chih-hao Hsieh
Community Assembly Processes as a Mechanistic Explanation of the Predator-Prey Diversity Relationship in Marine Microbes
Frontiers in Marine Science
biodiversity
community assembly processes
homogeneous versus heterogeneous selection
predator-prey diversity relationship
phylogeny
author_facet Feng-Hsun Chang
Jinny Wu Yang
Ariana Chih-Hsien Liu
Hsiao-Pei Lu
Gwo-Ching Gong
Gwo-Ching Gong
Fuh-Kwo Shiah
Fuh-Kwo Shiah
Fuh-Kwo Shiah
Chih-hao Hsieh
Chih-hao Hsieh
Chih-hao Hsieh
Chih-hao Hsieh
author_sort Feng-Hsun Chang
title Community Assembly Processes as a Mechanistic Explanation of the Predator-Prey Diversity Relationship in Marine Microbes
title_short Community Assembly Processes as a Mechanistic Explanation of the Predator-Prey Diversity Relationship in Marine Microbes
title_full Community Assembly Processes as a Mechanistic Explanation of the Predator-Prey Diversity Relationship in Marine Microbes
title_fullStr Community Assembly Processes as a Mechanistic Explanation of the Predator-Prey Diversity Relationship in Marine Microbes
title_full_unstemmed Community Assembly Processes as a Mechanistic Explanation of the Predator-Prey Diversity Relationship in Marine Microbes
title_sort community assembly processes as a mechanistic explanation of the predator-prey diversity relationship in marine microbes
publisher Frontiers Media S.A.
series Frontiers in Marine Science
issn 2296-7745
publishDate 2021-05-01
description Predator and prey α-diversities are often positively associated; yet, understandings of the underlying mechanisms require manipulative experiments and thus remain unclear. We attempt to address this issue by deciphering how α-diversity of predator and prey influences each other’s community assembly processes, which subsequently determine their α-diversity. The occurrence of assembly processes was indicated by the mean pairwise taxonomic index within a community (αMPTI), assuming assembly processes left traceable imprints on species’ phylogeny. Specifically, αMPTI quantifies deviations of observed phylogenetic distances from that of random, so that it can be used to hint at the occurrence of non-random/deterministic assembly processes. Larger αMPTI of a community implies the occurrence of weaker homogenizing deterministic assembly processes, which suggests that this community might be comprised of less similar species and thus has higher α-diversity. We hypothesize that higher predator and prey α-diversity would be positively associated with each other’s αMPTI, which would then be positively associated with their α-diversity. To test the hypothesis, we calculated Shannon diversity and αMPTI for heterotrophic nanoflagellates (HNF; predator) and bacteria (prey) communities in the East China Sea (ECS). The HNF Shannon diversity was found to be positively associated with αMPTI of bacteria, which was then positively associated with bacterial Shannon diversity. In contrast, bacterial Shannon diversity did not correlate with HNF’s αMPTI. We argue that top-down control is one of the explanations to the positive α-diversity association among trophic levels in microbes of the ECS.
topic biodiversity
community assembly processes
homogeneous versus heterogeneous selection
predator-prey diversity relationship
phylogeny
url https://www.frontiersin.org/articles/10.3389/fmars.2021.651565/full
work_keys_str_mv AT fenghsunchang communityassemblyprocessesasamechanisticexplanationofthepredatorpreydiversityrelationshipinmarinemicrobes
AT jinnywuyang communityassemblyprocessesasamechanisticexplanationofthepredatorpreydiversityrelationshipinmarinemicrobes
AT arianachihhsienliu communityassemblyprocessesasamechanisticexplanationofthepredatorpreydiversityrelationshipinmarinemicrobes
AT hsiaopeilu communityassemblyprocessesasamechanisticexplanationofthepredatorpreydiversityrelationshipinmarinemicrobes
AT gwochinggong communityassemblyprocessesasamechanisticexplanationofthepredatorpreydiversityrelationshipinmarinemicrobes
AT gwochinggong communityassemblyprocessesasamechanisticexplanationofthepredatorpreydiversityrelationshipinmarinemicrobes
AT fuhkwoshiah communityassemblyprocessesasamechanisticexplanationofthepredatorpreydiversityrelationshipinmarinemicrobes
AT fuhkwoshiah communityassemblyprocessesasamechanisticexplanationofthepredatorpreydiversityrelationshipinmarinemicrobes
AT fuhkwoshiah communityassemblyprocessesasamechanisticexplanationofthepredatorpreydiversityrelationshipinmarinemicrobes
AT chihhaohsieh communityassemblyprocessesasamechanisticexplanationofthepredatorpreydiversityrelationshipinmarinemicrobes
AT chihhaohsieh communityassemblyprocessesasamechanisticexplanationofthepredatorpreydiversityrelationshipinmarinemicrobes
AT chihhaohsieh communityassemblyprocessesasamechanisticexplanationofthepredatorpreydiversityrelationshipinmarinemicrobes
AT chihhaohsieh communityassemblyprocessesasamechanisticexplanationofthepredatorpreydiversityrelationshipinmarinemicrobes
_version_ 1721419349212790784