Enhancing Genetic Medicine: Rapid and Cost-Effective Molecular Diagnosis for a <i>GJB2</i> Founder Mutation for Hearing Impairment in Ghana

In Ghana, gap-junction protein &#946; 2 (<i>GJB2</i>) variants account for about 25.9% of familial hearing impairment (HI) cases. The <i>GJB2</i>-p.Arg143Trp (NM_004004.6:c.427C&gt;T/OMIM: 121011.0009/rs80338948) variant remains the most frequent variant associated wi...

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Main Authors: Samuel M. Adadey, Edmond Tingang Wonkam, Elvis Twumasi Aboagye, Darius Quansah, Adwoa Asante-Poku, Osbourne Quaye, Geoffrey K. Amedofu, Gordon A. Awandare, Ambroise Wonkam
Format: Article
Language:English
Published: MDPI AG 2020-01-01
Series:Genes
Subjects:
Online Access:https://www.mdpi.com/2073-4425/11/2/132
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spelling doaj-396486d80ca5436c8a3b453762f800562020-11-25T02:05:26ZengMDPI AGGenes2073-44252020-01-0111213210.3390/genes11020132genes11020132Enhancing Genetic Medicine: Rapid and Cost-Effective Molecular Diagnosis for a <i>GJB2</i> Founder Mutation for Hearing Impairment in GhanaSamuel M. Adadey0Edmond Tingang Wonkam1Elvis Twumasi Aboagye2Darius Quansah3Adwoa Asante-Poku4Osbourne Quaye5Geoffrey K. Amedofu6Gordon A. Awandare7Ambroise Wonkam8West African Centre for Cell Biology of Infectious Pathogens (WACCBIP), University of Ghana, Accra P. O. Box LG 54, GhanaDivision of Human Genetics, Faculty of Health Sciences, University of Cape Town, Cape Town 7925, South AfricaWest African Centre for Cell Biology of Infectious Pathogens (WACCBIP), University of Ghana, Accra P. O. Box LG 54, GhanaWest African Centre for Cell Biology of Infectious Pathogens (WACCBIP), University of Ghana, Accra P. O. Box LG 54, GhanaWest African Centre for Cell Biology of Infectious Pathogens (WACCBIP), University of Ghana, Accra P. O. Box LG 54, GhanaWest African Centre for Cell Biology of Infectious Pathogens (WACCBIP), University of Ghana, Accra P. O. Box LG 54, GhanaDepartment of Eye Ear Nose &amp; Throat, School of Medical Sciences, Kwame Nkrumah University of Science and Technology, Kumasi AK-039-5028, GhanaWest African Centre for Cell Biology of Infectious Pathogens (WACCBIP), University of Ghana, Accra P. O. Box LG 54, GhanaDivision of Human Genetics, Faculty of Health Sciences, University of Cape Town, Cape Town 7925, South AfricaIn Ghana, gap-junction protein &#946; 2 (<i>GJB2</i>) variants account for about 25.9% of familial hearing impairment (HI) cases. The <i>GJB2</i>-p.Arg143Trp (NM_004004.6:c.427C&gt;T/OMIM: 121011.0009/rs80338948) variant remains the most frequent variant associated with congenital HI in Ghana, but has not yet been investigated in clinical practice. We therefore sought to design a rapid and cost-effective test to detect this variant. We sampled 20 hearing-impaired and 10 normal hearing family members from 8 families segregating autosomal recessive non syndromic HI. In addition, a total of 111 unrelated isolated individuals with HI were selected, as well as 50 normal hearing control participants. A restriction fragment length polymorphism (RFLP) test was designed, using the restriction enzyme NciI optimized and validated with Sanger sequencing, for rapid genotyping of the common <i>GJB2</i>-p.Arg143Trp variant. All hearing-impaired participants from 7/8 families were homozygous positive for the <i>GJB2</i>-p.Arg143Trp mutation using the NciI<i>-</i>RFLP test, which was confirmed with Sanger sequencing. The investigation of 111 individuals with isolated non-syndromic HI that were previously Sanger sequenced found that the sensitivity of the <i>GJB2</i>-p.Arg143Trp NciI<i>-</i>RFLP testing was 100%. All the 50 control subjects with normal hearing were found to be negative for the variant. Although the test is extremely valuable, it is not 100% specific because it cannot differentiate between other mutations at the recognition site of the restriction enzyme. The <i>GJB2-</i>p.Arg143Trp NciI<i>-</i>RFLP-based diagnostic test had a high sensitivity for genotyping the most common <i>GJB2</i> pathogenic and founder variant (p.Arg143Trp) within the Ghanaian populations. We recommend the adoption and implementation of this test for hearing impairment genetic clinical investigations to complement the newborn hearing screening program in Ghana. The present study is a practical case scenario of enhancing genetic medicine in Africa.https://www.mdpi.com/2073-4425/11/2/132hearing impairment<i>gjb2</i>-p.r143wncii-rflprapid diagnostic testghana
collection DOAJ
language English
format Article
sources DOAJ
author Samuel M. Adadey
Edmond Tingang Wonkam
Elvis Twumasi Aboagye
Darius Quansah
Adwoa Asante-Poku
Osbourne Quaye
Geoffrey K. Amedofu
Gordon A. Awandare
Ambroise Wonkam
spellingShingle Samuel M. Adadey
Edmond Tingang Wonkam
Elvis Twumasi Aboagye
Darius Quansah
Adwoa Asante-Poku
Osbourne Quaye
Geoffrey K. Amedofu
Gordon A. Awandare
Ambroise Wonkam
Enhancing Genetic Medicine: Rapid and Cost-Effective Molecular Diagnosis for a <i>GJB2</i> Founder Mutation for Hearing Impairment in Ghana
Genes
hearing impairment
<i>gjb2</i>-p.r143w
ncii-rflp
rapid diagnostic test
ghana
author_facet Samuel M. Adadey
Edmond Tingang Wonkam
Elvis Twumasi Aboagye
Darius Quansah
Adwoa Asante-Poku
Osbourne Quaye
Geoffrey K. Amedofu
Gordon A. Awandare
Ambroise Wonkam
author_sort Samuel M. Adadey
title Enhancing Genetic Medicine: Rapid and Cost-Effective Molecular Diagnosis for a <i>GJB2</i> Founder Mutation for Hearing Impairment in Ghana
title_short Enhancing Genetic Medicine: Rapid and Cost-Effective Molecular Diagnosis for a <i>GJB2</i> Founder Mutation for Hearing Impairment in Ghana
title_full Enhancing Genetic Medicine: Rapid and Cost-Effective Molecular Diagnosis for a <i>GJB2</i> Founder Mutation for Hearing Impairment in Ghana
title_fullStr Enhancing Genetic Medicine: Rapid and Cost-Effective Molecular Diagnosis for a <i>GJB2</i> Founder Mutation for Hearing Impairment in Ghana
title_full_unstemmed Enhancing Genetic Medicine: Rapid and Cost-Effective Molecular Diagnosis for a <i>GJB2</i> Founder Mutation for Hearing Impairment in Ghana
title_sort enhancing genetic medicine: rapid and cost-effective molecular diagnosis for a <i>gjb2</i> founder mutation for hearing impairment in ghana
publisher MDPI AG
series Genes
issn 2073-4425
publishDate 2020-01-01
description In Ghana, gap-junction protein &#946; 2 (<i>GJB2</i>) variants account for about 25.9% of familial hearing impairment (HI) cases. The <i>GJB2</i>-p.Arg143Trp (NM_004004.6:c.427C&gt;T/OMIM: 121011.0009/rs80338948) variant remains the most frequent variant associated with congenital HI in Ghana, but has not yet been investigated in clinical practice. We therefore sought to design a rapid and cost-effective test to detect this variant. We sampled 20 hearing-impaired and 10 normal hearing family members from 8 families segregating autosomal recessive non syndromic HI. In addition, a total of 111 unrelated isolated individuals with HI were selected, as well as 50 normal hearing control participants. A restriction fragment length polymorphism (RFLP) test was designed, using the restriction enzyme NciI optimized and validated with Sanger sequencing, for rapid genotyping of the common <i>GJB2</i>-p.Arg143Trp variant. All hearing-impaired participants from 7/8 families were homozygous positive for the <i>GJB2</i>-p.Arg143Trp mutation using the NciI<i>-</i>RFLP test, which was confirmed with Sanger sequencing. The investigation of 111 individuals with isolated non-syndromic HI that were previously Sanger sequenced found that the sensitivity of the <i>GJB2</i>-p.Arg143Trp NciI<i>-</i>RFLP testing was 100%. All the 50 control subjects with normal hearing were found to be negative for the variant. Although the test is extremely valuable, it is not 100% specific because it cannot differentiate between other mutations at the recognition site of the restriction enzyme. The <i>GJB2-</i>p.Arg143Trp NciI<i>-</i>RFLP-based diagnostic test had a high sensitivity for genotyping the most common <i>GJB2</i> pathogenic and founder variant (p.Arg143Trp) within the Ghanaian populations. We recommend the adoption and implementation of this test for hearing impairment genetic clinical investigations to complement the newborn hearing screening program in Ghana. The present study is a practical case scenario of enhancing genetic medicine in Africa.
topic hearing impairment
<i>gjb2</i>-p.r143w
ncii-rflp
rapid diagnostic test
ghana
url https://www.mdpi.com/2073-4425/11/2/132
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