Molecular model of a sensor of two-component signaling system
Abstract Two-component systems (TCS) are widespread signaling systems present in all domains of life. TCS typically consist of a signal receptor/transducer and a response regulator. The receptors (histidine kinases, chemoreceptors and photoreceptors) are often embedded in the membrane and have a sim...
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doaj-3f760df645e345b1a2dd8988f064b12e2021-05-30T11:35:05ZengNature Publishing GroupScientific Reports2045-23222021-05-0111111510.1038/s41598-021-89613-6Molecular model of a sensor of two-component signaling systemYury L. Ryzhykau0Philipp S. Orekhov1Maksim I. Rulev2Alexey V. Vlasov3Igor A. Melnikov4Dmytro A. Volkov5Mikhail Yu. Nikolaev6Dmitrii V. Zabelskii7Tatiana N. Murugova8Vladimir V. Chupin9Andrey V. Rogachev10Andrey Yu. Gruzinov11Dmitri I. Svergun12Martha E. Brennich13Ivan Yu. Gushchin14Montserrat Soler-Lopez15Arne Bothe16Georg Büldt17Gordon Leonard18Martin Engelhard19Alexander I. Kuklin20Valentin I. Gordeliy21Research Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and TechnologyResearch Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and TechnologyStructural Biology Group, European Synchrotron Radiation FacilityResearch Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and TechnologyStructural Biology Group, European Synchrotron Radiation FacilityInstitute of Biological Information Processing (IBI-7: Structural Biochemistry), Forschungszentrum JülichResearch Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and TechnologyResearch Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and TechnologyResearch Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and TechnologyResearch Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and TechnologyResearch Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and TechnologyEuropean Molecular Biology Laboratory, Hamburg OutstationEuropean Molecular Biology Laboratory, Hamburg OutstationSynchrotron Crystallography Team, EMBL Grenoble OutstationResearch Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and TechnologyStructural Biology Group, European Synchrotron Radiation FacilityDepartment Structural Biochemistry, Max Planck Institute of Molecular PhysiologyResearch Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and TechnologyStructural Biology Group, European Synchrotron Radiation FacilityDepartment Structural Biochemistry, Max Planck Institute of Molecular PhysiologyResearch Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and TechnologyResearch Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and TechnologyAbstract Two-component systems (TCS) are widespread signaling systems present in all domains of life. TCS typically consist of a signal receptor/transducer and a response regulator. The receptors (histidine kinases, chemoreceptors and photoreceptors) are often embedded in the membrane and have a similar modular structure. Chemoreceptors were shown to function in highly ordered arrays, with trimers of dimers being the smallest functional unit. However, much less is known about photoreceptors. Here, we use small-angle scattering (SAS) to show that detergent-solubilized sensory rhodopsin II in complex with its cognate transducer forms dimers at low salt concentration, which associate into trimers of dimers at higher buffer molarities. We then fit an atomistic model of the whole complex into the SAS data. The obtained results suggest that the trimer of dimers is "tripod"-shaped and that the contacts between the dimers occur only through their cytoplasmic regions, whereas the transmembrane regions remain unconnected.https://doi.org/10.1038/s41598-021-89613-6 |
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DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Yury L. Ryzhykau Philipp S. Orekhov Maksim I. Rulev Alexey V. Vlasov Igor A. Melnikov Dmytro A. Volkov Mikhail Yu. Nikolaev Dmitrii V. Zabelskii Tatiana N. Murugova Vladimir V. Chupin Andrey V. Rogachev Andrey Yu. Gruzinov Dmitri I. Svergun Martha E. Brennich Ivan Yu. Gushchin Montserrat Soler-Lopez Arne Bothe Georg Büldt Gordon Leonard Martin Engelhard Alexander I. Kuklin Valentin I. Gordeliy |
spellingShingle |
Yury L. Ryzhykau Philipp S. Orekhov Maksim I. Rulev Alexey V. Vlasov Igor A. Melnikov Dmytro A. Volkov Mikhail Yu. Nikolaev Dmitrii V. Zabelskii Tatiana N. Murugova Vladimir V. Chupin Andrey V. Rogachev Andrey Yu. Gruzinov Dmitri I. Svergun Martha E. Brennich Ivan Yu. Gushchin Montserrat Soler-Lopez Arne Bothe Georg Büldt Gordon Leonard Martin Engelhard Alexander I. Kuklin Valentin I. Gordeliy Molecular model of a sensor of two-component signaling system Scientific Reports |
author_facet |
Yury L. Ryzhykau Philipp S. Orekhov Maksim I. Rulev Alexey V. Vlasov Igor A. Melnikov Dmytro A. Volkov Mikhail Yu. Nikolaev Dmitrii V. Zabelskii Tatiana N. Murugova Vladimir V. Chupin Andrey V. Rogachev Andrey Yu. Gruzinov Dmitri I. Svergun Martha E. Brennich Ivan Yu. Gushchin Montserrat Soler-Lopez Arne Bothe Georg Büldt Gordon Leonard Martin Engelhard Alexander I. Kuklin Valentin I. Gordeliy |
author_sort |
Yury L. Ryzhykau |
title |
Molecular model of a sensor of two-component signaling system |
title_short |
Molecular model of a sensor of two-component signaling system |
title_full |
Molecular model of a sensor of two-component signaling system |
title_fullStr |
Molecular model of a sensor of two-component signaling system |
title_full_unstemmed |
Molecular model of a sensor of two-component signaling system |
title_sort |
molecular model of a sensor of two-component signaling system |
publisher |
Nature Publishing Group |
series |
Scientific Reports |
issn |
2045-2322 |
publishDate |
2021-05-01 |
description |
Abstract Two-component systems (TCS) are widespread signaling systems present in all domains of life. TCS typically consist of a signal receptor/transducer and a response regulator. The receptors (histidine kinases, chemoreceptors and photoreceptors) are often embedded in the membrane and have a similar modular structure. Chemoreceptors were shown to function in highly ordered arrays, with trimers of dimers being the smallest functional unit. However, much less is known about photoreceptors. Here, we use small-angle scattering (SAS) to show that detergent-solubilized sensory rhodopsin II in complex with its cognate transducer forms dimers at low salt concentration, which associate into trimers of dimers at higher buffer molarities. We then fit an atomistic model of the whole complex into the SAS data. The obtained results suggest that the trimer of dimers is "tripod"-shaped and that the contacts between the dimers occur only through their cytoplasmic regions, whereas the transmembrane regions remain unconnected. |
url |
https://doi.org/10.1038/s41598-021-89613-6 |
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