WGSQuikr: fast whole-genome shotgun metagenomic classification.

With the decrease in cost and increase in output of whole-genome shotgun technologies, many metagenomic studies are utilizing this approach in lieu of the more traditional 16S rRNA amplicon technique. Due to the large number of relatively short reads output from whole-genome shotgun technologies, th...

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Bibliographic Details
Main Authors: David Koslicki, Simon Foucart, Gail Rosen
Format: Article
Published: Public Library of Science (PLoS) 2014-01-01
Series:PLoS ONE
Online Access:http://europepmc.org/articles/PMC3953531?pdf=render