<i>C</i>-Methylation of <i>S</i>-adenosyl-L-Methionine Occurs Prior to Cyclopropanation in the Biosynthesis of 1-Amino-2-Methylcyclopropanecarboxylic Acid (Norcoronamic Acid) in a Bacterium

Many pharmacologically important peptides are bacterial or fungal in origin and contain nonproteinogenic amino acid (NPA) building blocks. Recently, it was reported that, in bacteria, a cyclopropane-containing NPA 1-aminocyclopropanecarboxylic acid (ACC) is produced from the L-methionine moiety of &...

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Main Authors: Chitose Maruyama, Yukiko Chinone, Shusuke Sato, Fumitaka Kudo, Kosuke Ohsawa, Junya Kubota, Junko Hashimoto, Ikuko Kozone, Takayuki Doi, Kazuo Shin-ya, Tadashi Eguchi, Yoshimitsu Hamano
Format: Article
Language:English
Published: MDPI AG 2020-05-01
Series:Biomolecules
Subjects:
Online Access:https://www.mdpi.com/2218-273X/10/5/775
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spelling doaj-526343c29b044f1396e2b1ae34af09152020-11-25T02:20:55ZengMDPI AGBiomolecules2218-273X2020-05-011077577510.3390/biom10050775<i>C</i>-Methylation of <i>S</i>-adenosyl-L-Methionine Occurs Prior to Cyclopropanation in the Biosynthesis of 1-Amino-2-Methylcyclopropanecarboxylic Acid (Norcoronamic Acid) in a BacteriumChitose Maruyama0Yukiko Chinone1Shusuke Sato2Fumitaka Kudo3Kosuke Ohsawa4Junya Kubota5Junko Hashimoto6Ikuko Kozone7Takayuki Doi8Kazuo Shin-ya9Tadashi Eguchi10Yoshimitsu Hamano11Department of Bioscience, Fukui Prefectural University, 4-1-1 Yoshida-Gun, Fukui 910-1195, JapanDepartment of Bioscience, Fukui Prefectural University, 4-1-1 Yoshida-Gun, Fukui 910-1195, JapanDepartment of Chemistry, Tokyo Institute of Technology, 2-12-1 O-okayama, Meguro-ku, Tokyo 152-8551, JapanDepartment of Chemistry, Tokyo Institute of Technology, 2-12-1 O-okayama, Meguro-ku, Tokyo 152-8551, JapanGraduate School of Life Sciences, Tohoku University, 6-3 Aza-aoba, Aramaki, Aoba-ku, Sendai 980-8578, JapanGraduate School of Life Sciences, Tohoku University, 6-3 Aza-aoba, Aramaki, Aoba-ku, Sendai 980-8578, JapanJapan Biological Informatics Consortium (JBIC), 2-4-7 Aomi, Koto-ku, Tokyo 135-0064, JapanJapan Biological Informatics Consortium (JBIC), 2-4-7 Aomi, Koto-ku, Tokyo 135-0064, JapanGraduate School of Life Sciences, Tohoku University, 6-3 Aza-aoba, Aramaki, Aoba-ku, Sendai 980-8578, JapanNational Institute of Advanced Industrial Science and Technology, 2-4-7 Aomi, Koto-ku, Tokyo 135-0064, JapanDepartment of Chemistry, Tokyo Institute of Technology, 2-12-1 O-okayama, Meguro-ku, Tokyo 152-8551, JapanDepartment of Bioscience, Fukui Prefectural University, 4-1-1 Yoshida-Gun, Fukui 910-1195, JapanMany pharmacologically important peptides are bacterial or fungal in origin and contain nonproteinogenic amino acid (NPA) building blocks. Recently, it was reported that, in bacteria, a cyclopropane-containing NPA 1-aminocyclopropanecarboxylic acid (ACC) is produced from the L-methionine moiety of <i>S</i>-adenosyl-L-methionine (SAM) by non-canonical ACC-forming enzymes. On the other hand, it has been suggested that a monomethylated ACC analogue, 2-methyl-ACC (MeACC), is derived from L-valine. Therefore, we have investigated the MeACC biosynthesis by identifying a gene cluster containing bacterial MeACC synthase genes. In this gene cluster, we identified two genes, <i>orf29</i> and <i>orf30</i>, which encode a cobalamin (B12)-dependent radical SAM methyltransferase and a bacterial ACC synthase, respectively, and were found to be involved in the MeACC biosynthesis. In vitro analysis using their recombinant enzymes (rOrf29 and rOrf30) further revealed that the ACC structure of MeACC was derived from the L-methionine moiety of SAM, rather than L-valine. In addition, rOrf29 was found to catalyze the <i>C</i>-methylation of the L-methionine moiety of SAM. The resulting methylated derivative of SAM was then converted into MeACC by rOrf30. Thus, we demonstrate that <i>C</i>-methylation of SAM occurs prior to cyclopropanation in the biosynthesis of a bacterial MeACC (norcoronamic acid).https://www.mdpi.com/2218-273X/10/5/7751-amino-2-methylcyclopropanecarboxylic acid1-aminocyclopropanecarboxylic acid (ACC)ACC synthaseradical <i>S</i>-adenosyl-L-methionine (SAM) methyltransferase
collection DOAJ
language English
format Article
sources DOAJ
author Chitose Maruyama
Yukiko Chinone
Shusuke Sato
Fumitaka Kudo
Kosuke Ohsawa
Junya Kubota
Junko Hashimoto
Ikuko Kozone
Takayuki Doi
Kazuo Shin-ya
Tadashi Eguchi
Yoshimitsu Hamano
spellingShingle Chitose Maruyama
Yukiko Chinone
Shusuke Sato
Fumitaka Kudo
Kosuke Ohsawa
Junya Kubota
Junko Hashimoto
Ikuko Kozone
Takayuki Doi
Kazuo Shin-ya
Tadashi Eguchi
Yoshimitsu Hamano
<i>C</i>-Methylation of <i>S</i>-adenosyl-L-Methionine Occurs Prior to Cyclopropanation in the Biosynthesis of 1-Amino-2-Methylcyclopropanecarboxylic Acid (Norcoronamic Acid) in a Bacterium
Biomolecules
1-amino-2-methylcyclopropanecarboxylic acid
1-aminocyclopropanecarboxylic acid (ACC)
ACC synthase
radical <i>S</i>-adenosyl-L-methionine (SAM) methyltransferase
author_facet Chitose Maruyama
Yukiko Chinone
Shusuke Sato
Fumitaka Kudo
Kosuke Ohsawa
Junya Kubota
Junko Hashimoto
Ikuko Kozone
Takayuki Doi
Kazuo Shin-ya
Tadashi Eguchi
Yoshimitsu Hamano
author_sort Chitose Maruyama
title <i>C</i>-Methylation of <i>S</i>-adenosyl-L-Methionine Occurs Prior to Cyclopropanation in the Biosynthesis of 1-Amino-2-Methylcyclopropanecarboxylic Acid (Norcoronamic Acid) in a Bacterium
title_short <i>C</i>-Methylation of <i>S</i>-adenosyl-L-Methionine Occurs Prior to Cyclopropanation in the Biosynthesis of 1-Amino-2-Methylcyclopropanecarboxylic Acid (Norcoronamic Acid) in a Bacterium
title_full <i>C</i>-Methylation of <i>S</i>-adenosyl-L-Methionine Occurs Prior to Cyclopropanation in the Biosynthesis of 1-Amino-2-Methylcyclopropanecarboxylic Acid (Norcoronamic Acid) in a Bacterium
title_fullStr <i>C</i>-Methylation of <i>S</i>-adenosyl-L-Methionine Occurs Prior to Cyclopropanation in the Biosynthesis of 1-Amino-2-Methylcyclopropanecarboxylic Acid (Norcoronamic Acid) in a Bacterium
title_full_unstemmed <i>C</i>-Methylation of <i>S</i>-adenosyl-L-Methionine Occurs Prior to Cyclopropanation in the Biosynthesis of 1-Amino-2-Methylcyclopropanecarboxylic Acid (Norcoronamic Acid) in a Bacterium
title_sort <i>c</i>-methylation of <i>s</i>-adenosyl-l-methionine occurs prior to cyclopropanation in the biosynthesis of 1-amino-2-methylcyclopropanecarboxylic acid (norcoronamic acid) in a bacterium
publisher MDPI AG
series Biomolecules
issn 2218-273X
publishDate 2020-05-01
description Many pharmacologically important peptides are bacterial or fungal in origin and contain nonproteinogenic amino acid (NPA) building blocks. Recently, it was reported that, in bacteria, a cyclopropane-containing NPA 1-aminocyclopropanecarboxylic acid (ACC) is produced from the L-methionine moiety of <i>S</i>-adenosyl-L-methionine (SAM) by non-canonical ACC-forming enzymes. On the other hand, it has been suggested that a monomethylated ACC analogue, 2-methyl-ACC (MeACC), is derived from L-valine. Therefore, we have investigated the MeACC biosynthesis by identifying a gene cluster containing bacterial MeACC synthase genes. In this gene cluster, we identified two genes, <i>orf29</i> and <i>orf30</i>, which encode a cobalamin (B12)-dependent radical SAM methyltransferase and a bacterial ACC synthase, respectively, and were found to be involved in the MeACC biosynthesis. In vitro analysis using their recombinant enzymes (rOrf29 and rOrf30) further revealed that the ACC structure of MeACC was derived from the L-methionine moiety of SAM, rather than L-valine. In addition, rOrf29 was found to catalyze the <i>C</i>-methylation of the L-methionine moiety of SAM. The resulting methylated derivative of SAM was then converted into MeACC by rOrf30. Thus, we demonstrate that <i>C</i>-methylation of SAM occurs prior to cyclopropanation in the biosynthesis of a bacterial MeACC (norcoronamic acid).
topic 1-amino-2-methylcyclopropanecarboxylic acid
1-aminocyclopropanecarboxylic acid (ACC)
ACC synthase
radical <i>S</i>-adenosyl-L-methionine (SAM) methyltransferase
url https://www.mdpi.com/2218-273X/10/5/775
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