Epigenetic Markers of Renal Function in African Americans

Chronic kidney disease (CKD) is an increasing concern in the United States due to its rapidly rising prevalence, particularly among African Americans. Epigenetic DNA methylation markers are becoming important biomarkers of chronic diseases such as CKD. To better understand how these methylation mark...

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Main Authors: Samantha M. Bomotti, Jennifer A. Smith, Alicia L. Zagel, Jacquelyn Y. Taylor, Stephen T. Turner, Sharon L. R. Kardia
Format: Article
Language:English
Published: Hindawi Limited 2013-01-01
Series:Nursing Research and Practice
Online Access:http://dx.doi.org/10.1155/2013/687519
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spelling doaj-5aa763029bc441739c59a5fd57cb78f22020-11-25T00:49:53ZengHindawi LimitedNursing Research and Practice2090-14292090-14372013-01-01201310.1155/2013/687519687519Epigenetic Markers of Renal Function in African AmericansSamantha M. Bomotti0Jennifer A. Smith1Alicia L. Zagel2Jacquelyn Y. Taylor3Stephen T. Turner4Sharon L. R. Kardia5Department of Epidemiology, Bloomberg School of Public Health, Johns Hopkins University, Baltimore, MD 21205, USADepartment of Epidemiology, School of Public Health, University of Michigan, 1415 Washington Heights, No. 4629, Ann Arbor, MI 48109, USACenter for Health Statistics, Washington State Department of Health, Olympia, WA 98501, USASchool of Nursing, Yale University, New Haven, CT 06477, USADivision of Nephrology and Hypertension, Mayo Clinic, Rochester, MN 55905, USADepartment of Epidemiology, School of Public Health, University of Michigan, 1415 Washington Heights, No. 4629, Ann Arbor, MI 48109, USAChronic kidney disease (CKD) is an increasing concern in the United States due to its rapidly rising prevalence, particularly among African Americans. Epigenetic DNA methylation markers are becoming important biomarkers of chronic diseases such as CKD. To better understand how these methylation markers play a role in kidney function, we measured 26,428 DNA methylation sites in 972 African Americans from the Genetic Epidemiology Network of Arteriopathy (GENOA) study. We then evaluated (1) whether epigenetic markers are associated with estimated glomerular filtration rate (eGFR), (2) whether the significantly associated markers are also associated with traditional risk factors and/or novel biomarkers for eGFR, and (3) how much additional variation in eGFR is explained by epigenetic markers beyond established risk factors and biomarkers. The majority of methylation markers most significantly associated with eGFR (24 out of the top 30) appeared to function, at least in part, through pathways related to aging, inflammation, or cholesterol. However, six epigenetic markers were still able to significantly predict eGFR after adjustment for other risk factors. This work shows that epigenetic markers may offer valuable new insight into the complex pathophysiology of CKD in African Americans.http://dx.doi.org/10.1155/2013/687519
collection DOAJ
language English
format Article
sources DOAJ
author Samantha M. Bomotti
Jennifer A. Smith
Alicia L. Zagel
Jacquelyn Y. Taylor
Stephen T. Turner
Sharon L. R. Kardia
spellingShingle Samantha M. Bomotti
Jennifer A. Smith
Alicia L. Zagel
Jacquelyn Y. Taylor
Stephen T. Turner
Sharon L. R. Kardia
Epigenetic Markers of Renal Function in African Americans
Nursing Research and Practice
author_facet Samantha M. Bomotti
Jennifer A. Smith
Alicia L. Zagel
Jacquelyn Y. Taylor
Stephen T. Turner
Sharon L. R. Kardia
author_sort Samantha M. Bomotti
title Epigenetic Markers of Renal Function in African Americans
title_short Epigenetic Markers of Renal Function in African Americans
title_full Epigenetic Markers of Renal Function in African Americans
title_fullStr Epigenetic Markers of Renal Function in African Americans
title_full_unstemmed Epigenetic Markers of Renal Function in African Americans
title_sort epigenetic markers of renal function in african americans
publisher Hindawi Limited
series Nursing Research and Practice
issn 2090-1429
2090-1437
publishDate 2013-01-01
description Chronic kidney disease (CKD) is an increasing concern in the United States due to its rapidly rising prevalence, particularly among African Americans. Epigenetic DNA methylation markers are becoming important biomarkers of chronic diseases such as CKD. To better understand how these methylation markers play a role in kidney function, we measured 26,428 DNA methylation sites in 972 African Americans from the Genetic Epidemiology Network of Arteriopathy (GENOA) study. We then evaluated (1) whether epigenetic markers are associated with estimated glomerular filtration rate (eGFR), (2) whether the significantly associated markers are also associated with traditional risk factors and/or novel biomarkers for eGFR, and (3) how much additional variation in eGFR is explained by epigenetic markers beyond established risk factors and biomarkers. The majority of methylation markers most significantly associated with eGFR (24 out of the top 30) appeared to function, at least in part, through pathways related to aging, inflammation, or cholesterol. However, six epigenetic markers were still able to significantly predict eGFR after adjustment for other risk factors. This work shows that epigenetic markers may offer valuable new insight into the complex pathophysiology of CKD in African Americans.
url http://dx.doi.org/10.1155/2013/687519
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