Dataset on 21 autosomal and two sex determining short tandem repeat loci in the Kedayan population in Borneo, Malaysia
This data article provides population frequencies for 21 autosomal and two sex determining short tandem repeat (STR) loci in unrelated Kedayan individuals. This article is related to the research paper entitled “Forensic parameters and ancestral fraction in the Kedayan population inferred using 21 a...
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doaj-a13fcd249543495988c91d9f58c3033e2020-11-25T03:27:55ZengElsevierData in Brief2352-34092020-08-0131105909Dataset on 21 autosomal and two sex determining short tandem repeat loci in the Kedayan population in Borneo, MalaysiaHashom Mohd Hakim0Hussein Omar Khan1Siti Afifah Ismail2Japareng Lalung3Abban Edward Kofi4Mohd Tajuddin Abdullah5Geoffrey Keith Chambers6Hisham Atan Edinur7DNA Databank Division (D13), Criminal Investigation Department, Royal Malaysian Police, 43200, Cheras, Selangor, Malaysia; School of Industrial Technology, Universiti Sains Malaysia, 11800, Pulau Pinang, Malaysia; Corresponding authors.DNA Databank Division (D13), Criminal Investigation Department, Royal Malaysian Police, 43200, Cheras, Selangor, MalaysiaDNA Databank Division (D13), Criminal Investigation Department, Royal Malaysian Police, 43200, Cheras, Selangor, MalaysiaSchool of Industrial Technology, Universiti Sains Malaysia, 11800, Pulau Pinang, MalaysiaForensic Science Programme, School of Health Sciences, Universiti Sains Malaysia, Health Campus, 16150 Kubang Kerian, Kelantan, MalaysiaInstitute of Tropical Biodiversity and Sustainable Development, Universiti Malaysia Terengganu, 21030 Kuala Nerus, Terengganu, MalaysiaSchool of Biological Sciences, Victoria University of Wellington, P.O. Box 600, Wellington, New ZealandForensic Science Programme, School of Health Sciences, Universiti Sains Malaysia, Health Campus, 16150 Kubang Kerian, Kelantan, Malaysia; Institute of Tropical Biodiversity and Sustainable Development, Universiti Malaysia Terengganu, 21030 Kuala Nerus, Terengganu, Malaysia; Environmental Futures Research Institute, Griffith University, Nathan, Queensland 4111, Australia; Corresponding authors.This data article provides population frequencies for 21 autosomal and two sex determining short tandem repeat (STR) loci in unrelated Kedayan individuals. This article is related to the research paper entitled “Forensic parameters and ancestral fraction in the Kedayan population inferred using 21 autosomal STR loci” [1] where these same data were subjected to ancestry and forensic analyses. We have collected 200 blood samples consisting of 128 male and 72 female volunteer representatives from Kedayan people residing in various parts of Borneo. All 23 STR loci were simultaneously amplified using Globalfiler™ Express PCR and amplicons were separated using an ABI 3500xl Genetic Analyzer. The STR allele calls at each locus were called using GeneMapperⓇ ID-X Software v1.4, while several algorithms in Arlequin software version 3.5 were used to estimate Hardy–Weinberg equilibrium (HWE) and linkage disequilibrium (LD) between pairs of STR loci.http://www.sciencedirect.com/science/article/pii/S2352340920308039Genetic markersPopulation dataAutosomal strForensic parameterKedayan and Globalfiler™ express |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Hashom Mohd Hakim Hussein Omar Khan Siti Afifah Ismail Japareng Lalung Abban Edward Kofi Mohd Tajuddin Abdullah Geoffrey Keith Chambers Hisham Atan Edinur |
spellingShingle |
Hashom Mohd Hakim Hussein Omar Khan Siti Afifah Ismail Japareng Lalung Abban Edward Kofi Mohd Tajuddin Abdullah Geoffrey Keith Chambers Hisham Atan Edinur Dataset on 21 autosomal and two sex determining short tandem repeat loci in the Kedayan population in Borneo, Malaysia Data in Brief Genetic markers Population data Autosomal str Forensic parameter Kedayan and Globalfiler™ express |
author_facet |
Hashom Mohd Hakim Hussein Omar Khan Siti Afifah Ismail Japareng Lalung Abban Edward Kofi Mohd Tajuddin Abdullah Geoffrey Keith Chambers Hisham Atan Edinur |
author_sort |
Hashom Mohd Hakim |
title |
Dataset on 21 autosomal and two sex determining short tandem repeat loci in the Kedayan population in Borneo, Malaysia |
title_short |
Dataset on 21 autosomal and two sex determining short tandem repeat loci in the Kedayan population in Borneo, Malaysia |
title_full |
Dataset on 21 autosomal and two sex determining short tandem repeat loci in the Kedayan population in Borneo, Malaysia |
title_fullStr |
Dataset on 21 autosomal and two sex determining short tandem repeat loci in the Kedayan population in Borneo, Malaysia |
title_full_unstemmed |
Dataset on 21 autosomal and two sex determining short tandem repeat loci in the Kedayan population in Borneo, Malaysia |
title_sort |
dataset on 21 autosomal and two sex determining short tandem repeat loci in the kedayan population in borneo, malaysia |
publisher |
Elsevier |
series |
Data in Brief |
issn |
2352-3409 |
publishDate |
2020-08-01 |
description |
This data article provides population frequencies for 21 autosomal and two sex determining short tandem repeat (STR) loci in unrelated Kedayan individuals. This article is related to the research paper entitled “Forensic parameters and ancestral fraction in the Kedayan population inferred using 21 autosomal STR loci” [1] where these same data were subjected to ancestry and forensic analyses. We have collected 200 blood samples consisting of 128 male and 72 female volunteer representatives from Kedayan people residing in various parts of Borneo. All 23 STR loci were simultaneously amplified using Globalfiler™ Express PCR and amplicons were separated using an ABI 3500xl Genetic Analyzer. The STR allele calls at each locus were called using GeneMapperⓇ ID-X Software v1.4, while several algorithms in Arlequin software version 3.5 were used to estimate Hardy–Weinberg equilibrium (HWE) and linkage disequilibrium (LD) between pairs of STR loci. |
topic |
Genetic markers Population data Autosomal str Forensic parameter Kedayan and Globalfiler™ express |
url |
http://www.sciencedirect.com/science/article/pii/S2352340920308039 |
work_keys_str_mv |
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