Improved reconstruction of in silico gene regulatory networks by integrating knockout and perturbation data.

We performed computational reconstruction of the in silico gene regulatory networks in the DREAM3 Challenges. Our task was to learn the networks from two types of data, namely gene expression profiles in deletion strains (the 'deletion data') and time series trajectories of gene expression...

Full description

Bibliographic Details
Main Authors: Kevin Y Yip, Roger P Alexander, Koon-Kiu Yan, Mark Gerstein
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2010-01-01
Series:PLoS ONE
Online Access:http://europepmc.org/articles/PMC2811182?pdf=render