Improvement of glucaric acid production in E. coli via dynamic control of metabolic fluxes

D-glucaric acid can be used as a building block for biopolymers as well as in the formulation of detergents and corrosion inhibitors. A biosynthetic route for production in Escherichia coli has been developed (Moon et al., 2009), but previous work with the glucaric acid pathway has indicated that co...

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Main Authors: Irene M. Brockman Reizman, Andrew R. Stenger, Chris R. Reisch, Apoorv Gupta, Neal C. Connors, Kristala L.J. Prather
Format: Article
Language:English
Published: Elsevier 2015-12-01
Series:Metabolic Engineering Communications
Online Access:http://www.sciencedirect.com/science/article/pii/S2214030115300080
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spelling doaj-b045dda5c7104f18882628ed645f60fb2020-11-24T23:21:12ZengElsevierMetabolic Engineering Communications2214-03012015-12-012109116Improvement of glucaric acid production in E. coli via dynamic control of metabolic fluxesIrene M. Brockman Reizman0Andrew R. Stenger1Chris R. Reisch2Apoorv Gupta3Neal C. Connors4Kristala L.J. Prather5Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USAResearch Institute for Scientists Emeriti, Drew University, Madison, NJ 07940, USADepartment of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USADepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA; Synthetic Biology Engineering Research Center (SynBERC), Massachusetts Institute of Technology, Cambridge, MA 02139, USAResearch Institute for Scientists Emeriti, Drew University, Madison, NJ 07940, USA; Kalion, Inc., Milton, MA 02186, USADepartment of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA; Synthetic Biology Engineering Research Center (SynBERC), Massachusetts Institute of Technology, Cambridge, MA 02139, USA; Correspondence to: Department of Chemical Engineering, 77 Massachusetts Avenue Room E17-504 G, Cambridge, MA 02139, USA. Fax: +1 617 258 5042.D-glucaric acid can be used as a building block for biopolymers as well as in the formulation of detergents and corrosion inhibitors. A biosynthetic route for production in Escherichia coli has been developed (Moon et al., 2009), but previous work with the glucaric acid pathway has indicated that competition with endogenous metabolism may limit carbon flux into the pathway. Our group has recently developed an E. coli strain where phosphofructokinase (Pfk) activity can be dynamically controlled and demonstrated its use for improving yields and titers of the glucaric acid precursor myo-inositol on glucose minimal medium. In this work, we have explored the further applicability of this strain for glucaric acid production in a supplemented medium more relevant for scale-up studies, both under batch conditions and with glucose feeding via in situ enzymatic starch hydrolysis. It was found that glucaric acid titers could be improved by up to 42% with appropriately timed knockdown of Pfk activity during glucose feeding. The glucose feeding protocol could also be used for reduction of acetate production in the wild type and modified E. coli strains. Keywords: Dynamic metabolic engineering, Glucaric acid, Protein degradation, Synthetic biologyhttp://www.sciencedirect.com/science/article/pii/S2214030115300080
collection DOAJ
language English
format Article
sources DOAJ
author Irene M. Brockman Reizman
Andrew R. Stenger
Chris R. Reisch
Apoorv Gupta
Neal C. Connors
Kristala L.J. Prather
spellingShingle Irene M. Brockman Reizman
Andrew R. Stenger
Chris R. Reisch
Apoorv Gupta
Neal C. Connors
Kristala L.J. Prather
Improvement of glucaric acid production in E. coli via dynamic control of metabolic fluxes
Metabolic Engineering Communications
author_facet Irene M. Brockman Reizman
Andrew R. Stenger
Chris R. Reisch
Apoorv Gupta
Neal C. Connors
Kristala L.J. Prather
author_sort Irene M. Brockman Reizman
title Improvement of glucaric acid production in E. coli via dynamic control of metabolic fluxes
title_short Improvement of glucaric acid production in E. coli via dynamic control of metabolic fluxes
title_full Improvement of glucaric acid production in E. coli via dynamic control of metabolic fluxes
title_fullStr Improvement of glucaric acid production in E. coli via dynamic control of metabolic fluxes
title_full_unstemmed Improvement of glucaric acid production in E. coli via dynamic control of metabolic fluxes
title_sort improvement of glucaric acid production in e. coli via dynamic control of metabolic fluxes
publisher Elsevier
series Metabolic Engineering Communications
issn 2214-0301
publishDate 2015-12-01
description D-glucaric acid can be used as a building block for biopolymers as well as in the formulation of detergents and corrosion inhibitors. A biosynthetic route for production in Escherichia coli has been developed (Moon et al., 2009), but previous work with the glucaric acid pathway has indicated that competition with endogenous metabolism may limit carbon flux into the pathway. Our group has recently developed an E. coli strain where phosphofructokinase (Pfk) activity can be dynamically controlled and demonstrated its use for improving yields and titers of the glucaric acid precursor myo-inositol on glucose minimal medium. In this work, we have explored the further applicability of this strain for glucaric acid production in a supplemented medium more relevant for scale-up studies, both under batch conditions and with glucose feeding via in situ enzymatic starch hydrolysis. It was found that glucaric acid titers could be improved by up to 42% with appropriately timed knockdown of Pfk activity during glucose feeding. The glucose feeding protocol could also be used for reduction of acetate production in the wild type and modified E. coli strains. Keywords: Dynamic metabolic engineering, Glucaric acid, Protein degradation, Synthetic biology
url http://www.sciencedirect.com/science/article/pii/S2214030115300080
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