Improvement of glucaric acid production in E. coli via dynamic control of metabolic fluxes
D-glucaric acid can be used as a building block for biopolymers as well as in the formulation of detergents and corrosion inhibitors. A biosynthetic route for production in Escherichia coli has been developed (Moon et al., 2009), but previous work with the glucaric acid pathway has indicated that co...
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doaj-b045dda5c7104f18882628ed645f60fb2020-11-24T23:21:12ZengElsevierMetabolic Engineering Communications2214-03012015-12-012109116Improvement of glucaric acid production in E. coli via dynamic control of metabolic fluxesIrene M. Brockman Reizman0Andrew R. Stenger1Chris R. Reisch2Apoorv Gupta3Neal C. Connors4Kristala L.J. Prather5Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USAResearch Institute for Scientists Emeriti, Drew University, Madison, NJ 07940, USADepartment of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USADepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA; Synthetic Biology Engineering Research Center (SynBERC), Massachusetts Institute of Technology, Cambridge, MA 02139, USAResearch Institute for Scientists Emeriti, Drew University, Madison, NJ 07940, USA; Kalion, Inc., Milton, MA 02186, USADepartment of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA; Synthetic Biology Engineering Research Center (SynBERC), Massachusetts Institute of Technology, Cambridge, MA 02139, USA; Correspondence to: Department of Chemical Engineering, 77 Massachusetts Avenue Room E17-504 G, Cambridge, MA 02139, USA. Fax: +1 617 258 5042.D-glucaric acid can be used as a building block for biopolymers as well as in the formulation of detergents and corrosion inhibitors. A biosynthetic route for production in Escherichia coli has been developed (Moon et al., 2009), but previous work with the glucaric acid pathway has indicated that competition with endogenous metabolism may limit carbon flux into the pathway. Our group has recently developed an E. coli strain where phosphofructokinase (Pfk) activity can be dynamically controlled and demonstrated its use for improving yields and titers of the glucaric acid precursor myo-inositol on glucose minimal medium. In this work, we have explored the further applicability of this strain for glucaric acid production in a supplemented medium more relevant for scale-up studies, both under batch conditions and with glucose feeding via in situ enzymatic starch hydrolysis. It was found that glucaric acid titers could be improved by up to 42% with appropriately timed knockdown of Pfk activity during glucose feeding. The glucose feeding protocol could also be used for reduction of acetate production in the wild type and modified E. coli strains. Keywords: Dynamic metabolic engineering, Glucaric acid, Protein degradation, Synthetic biologyhttp://www.sciencedirect.com/science/article/pii/S2214030115300080 |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Irene M. Brockman Reizman Andrew R. Stenger Chris R. Reisch Apoorv Gupta Neal C. Connors Kristala L.J. Prather |
spellingShingle |
Irene M. Brockman Reizman Andrew R. Stenger Chris R. Reisch Apoorv Gupta Neal C. Connors Kristala L.J. Prather Improvement of glucaric acid production in E. coli via dynamic control of metabolic fluxes Metabolic Engineering Communications |
author_facet |
Irene M. Brockman Reizman Andrew R. Stenger Chris R. Reisch Apoorv Gupta Neal C. Connors Kristala L.J. Prather |
author_sort |
Irene M. Brockman Reizman |
title |
Improvement of glucaric acid production in E. coli via dynamic control of metabolic fluxes |
title_short |
Improvement of glucaric acid production in E. coli via dynamic control of metabolic fluxes |
title_full |
Improvement of glucaric acid production in E. coli via dynamic control of metabolic fluxes |
title_fullStr |
Improvement of glucaric acid production in E. coli via dynamic control of metabolic fluxes |
title_full_unstemmed |
Improvement of glucaric acid production in E. coli via dynamic control of metabolic fluxes |
title_sort |
improvement of glucaric acid production in e. coli via dynamic control of metabolic fluxes |
publisher |
Elsevier |
series |
Metabolic Engineering Communications |
issn |
2214-0301 |
publishDate |
2015-12-01 |
description |
D-glucaric acid can be used as a building block for biopolymers as well as in the formulation of detergents and corrosion inhibitors. A biosynthetic route for production in Escherichia coli has been developed (Moon et al., 2009), but previous work with the glucaric acid pathway has indicated that competition with endogenous metabolism may limit carbon flux into the pathway. Our group has recently developed an E. coli strain where phosphofructokinase (Pfk) activity can be dynamically controlled and demonstrated its use for improving yields and titers of the glucaric acid precursor myo-inositol on glucose minimal medium. In this work, we have explored the further applicability of this strain for glucaric acid production in a supplemented medium more relevant for scale-up studies, both under batch conditions and with glucose feeding via in situ enzymatic starch hydrolysis. It was found that glucaric acid titers could be improved by up to 42% with appropriately timed knockdown of Pfk activity during glucose feeding. The glucose feeding protocol could also be used for reduction of acetate production in the wild type and modified E. coli strains. Keywords: Dynamic metabolic engineering, Glucaric acid, Protein degradation, Synthetic biology |
url |
http://www.sciencedirect.com/science/article/pii/S2214030115300080 |
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