Antimicrobial Resistance Characteristics and Phylogenetic Groups of Escherichia coli Isolated From Diarrheic Calves in Southeast of Iran

Background: Antimicrobial resistance is one of the main challenges in diarrheal diseases in human and animals. Regardless to the main reason of the disease, approximately all antimicrobial actions including treatment, control and prevention are mostly centralized against Escherichi...

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Main Authors: Zahedeh Naderi, Reza Ghanbarpour, Masoud Sami
Format: Article
Language:English
Published: Alborz University of Medical Sciences 2016-11-01
Series:International Journal of Enteric Pathogens
Subjects:
Online Access:http://enterpathog.abzums.ac.ir/PDF/ijep-4-5.pdf
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spelling doaj-bd11a398a3524fd380bf1d590cda513b2020-11-24T23:02:47ZengAlborz University of Medical SciencesInternational Journal of Enteric Pathogens2345-33622322-58662016-11-0144e3710510.15171/ijep.2016.15ijep-20161017103253Antimicrobial Resistance Characteristics and Phylogenetic Groups of Escherichia coli Isolated From Diarrheic Calves in Southeast of IranZahedeh Naderi0Reza Ghanbarpour1Masoud Sami2Department of Pathobiology, Faculty of Veterinary Medicine, Shahid Bahonar University of Kerman, Kerman, IR IranDepartment of Pathobiology, Faculty of Veterinary Medicine, Shahid Bahonar University of Kerman, Kerman, IR IranDepartment of Food Sciences and Technology, School of Nutrition and Food Science, Isfahan University of Medical Sciences, Isfahan, IR IranBackground: Antimicrobial resistance is one of the main challenges in diarrheal diseases in human and animals. Regardless to the main reason of the disease, approximately all antimicrobial actions including treatment, control and prevention are mostly centralized against Escherichia coli (E. coli) strains. Objectives: This work purposed to antimicrobial resistance (AR) and determinate virulence genes and phylogenetic groups in E. coli isolates (n=170) obtained from calves with diarrhea. Materials and methods: Isolates were molecular characterized for 17 AR genes and 3 phylogenetic sequences. AR phenotyping were performed on all strains for 12 antimicrobial agents by using disc diffusion method. Results: All AR genes but qnrS were identified with different prevalence in E. coli isolates that the most common genes were aadA (20%), blaTEM (11.7%) and sulII (11.2 %) belonging to aminoglycoside, β-lactamase and sulphonamide families, respectively. Resistance to the penicillin and sulphamethoxazole drugs was found in 100% of isolates and followed by tetracycline (73.5%), streptomycin (60%), trimethoprim sulphamethoxazole (56.5%) and kanamycin (53.5%). The phylogenetic groups A and B1 considerably surrounded the majority of isolates with the frequency of 65.8% and 30.6%, respectively. Conclusions: In Iran, diarrheic calves have an important role as reservoir of resistant E. coli strains against the some drugs which are registered for treatment of calf diarrhea.http://enterpathog.abzums.ac.ir/PDF/ijep-4-5.pdfAntibiotic resistancediarrheacalvesEscherichia coliphylogenetic
collection DOAJ
language English
format Article
sources DOAJ
author Zahedeh Naderi
Reza Ghanbarpour
Masoud Sami
spellingShingle Zahedeh Naderi
Reza Ghanbarpour
Masoud Sami
Antimicrobial Resistance Characteristics and Phylogenetic Groups of Escherichia coli Isolated From Diarrheic Calves in Southeast of Iran
International Journal of Enteric Pathogens
Antibiotic resistance
diarrhea
calves
Escherichia coli
phylogenetic
author_facet Zahedeh Naderi
Reza Ghanbarpour
Masoud Sami
author_sort Zahedeh Naderi
title Antimicrobial Resistance Characteristics and Phylogenetic Groups of Escherichia coli Isolated From Diarrheic Calves in Southeast of Iran
title_short Antimicrobial Resistance Characteristics and Phylogenetic Groups of Escherichia coli Isolated From Diarrheic Calves in Southeast of Iran
title_full Antimicrobial Resistance Characteristics and Phylogenetic Groups of Escherichia coli Isolated From Diarrheic Calves in Southeast of Iran
title_fullStr Antimicrobial Resistance Characteristics and Phylogenetic Groups of Escherichia coli Isolated From Diarrheic Calves in Southeast of Iran
title_full_unstemmed Antimicrobial Resistance Characteristics and Phylogenetic Groups of Escherichia coli Isolated From Diarrheic Calves in Southeast of Iran
title_sort antimicrobial resistance characteristics and phylogenetic groups of escherichia coli isolated from diarrheic calves in southeast of iran
publisher Alborz University of Medical Sciences
series International Journal of Enteric Pathogens
issn 2345-3362
2322-5866
publishDate 2016-11-01
description Background: Antimicrobial resistance is one of the main challenges in diarrheal diseases in human and animals. Regardless to the main reason of the disease, approximately all antimicrobial actions including treatment, control and prevention are mostly centralized against Escherichia coli (E. coli) strains. Objectives: This work purposed to antimicrobial resistance (AR) and determinate virulence genes and phylogenetic groups in E. coli isolates (n=170) obtained from calves with diarrhea. Materials and methods: Isolates were molecular characterized for 17 AR genes and 3 phylogenetic sequences. AR phenotyping were performed on all strains for 12 antimicrobial agents by using disc diffusion method. Results: All AR genes but qnrS were identified with different prevalence in E. coli isolates that the most common genes were aadA (20%), blaTEM (11.7%) and sulII (11.2 %) belonging to aminoglycoside, β-lactamase and sulphonamide families, respectively. Resistance to the penicillin and sulphamethoxazole drugs was found in 100% of isolates and followed by tetracycline (73.5%), streptomycin (60%), trimethoprim sulphamethoxazole (56.5%) and kanamycin (53.5%). The phylogenetic groups A and B1 considerably surrounded the majority of isolates with the frequency of 65.8% and 30.6%, respectively. Conclusions: In Iran, diarrheic calves have an important role as reservoir of resistant E. coli strains against the some drugs which are registered for treatment of calf diarrhea.
topic Antibiotic resistance
diarrhea
calves
Escherichia coli
phylogenetic
url http://enterpathog.abzums.ac.ir/PDF/ijep-4-5.pdf
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AT rezaghanbarpour antimicrobialresistancecharacteristicsandphylogeneticgroupsofescherichiacoliisolatedfromdiarrheiccalvesinsoutheastofiran
AT masoudsami antimicrobialresistancecharacteristicsandphylogeneticgroupsofescherichiacoliisolatedfromdiarrheiccalvesinsoutheastofiran
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