The Identification of Nocardia in BAL Specimens of Bronchoscopic Patients by Using Classical and Molecular Methods

Background: Nocardiosis is a rare and potentially life-threatening infection caused by several species of the Nocardia genus. The objective of this study was to develop and evaluate a rapid and new method to clinically identify relevant Nocardia species. Rapid and accurate diagnosis of Nocardia spec...

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Main Authors: Eshraghi SS, Mardani N, Khalifehgholi M, Hosseini M, Mirhendi SH, Soori T, Heidarzadeh S, Saber S, Zarrinfar H, Ghasemi A, Pourmand MR
Format: Article
Language:fas
Published: Tehran University of Medical Sciences 2011-12-01
Series:Tehran University Medical Journal
Subjects:
Online Access:http://journals.tums.ac.ir/PdfMed.aspx?pdf_med=/upload_files/pdf/19565.pdf&manuscript_id=19565
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spelling doaj-cbe6e6a200d54d308ece2cd3a6f9446b2020-11-24T22:06:29ZfasTehran University of Medical SciencesTehran University Medical Journal1683-17641735-73222011-12-01699581587The Identification of Nocardia in BAL Specimens of Bronchoscopic Patients by Using Classical and Molecular MethodsEshraghi SSMardani NKhalifehgholi MHosseini MMirhendi SHSoori THeidarzadeh SSaber SZarrinfar HGhasemi APourmand MRBackground: Nocardiosis is a rare and potentially life-threatening infection caused by several species of the Nocardia genus. The objective of this study was to develop and evaluate a rapid and new method to clinically identify relevant Nocardia species. Rapid and accurate diagnosis of Nocardia species is essential for the treatment of severe infections and prevention of cerebral abscess. Methods: One hundred and eighty patients, 103 (57.22%) male and 77 (42.78%) female, with severe symptomatic pulmonary infection were studied in the course of a 12-month period in Dr. Shariati Teaching Hospital affiliated to Tehran University of Medical Sciences in 2010. The specimens were cultured and identified using microbiological and biochemical tests. Polymerase chain reaction (PCR) was used to directly identify the organism in the broncoalveolar lavage samples collected from the patients. NG1 and NG2 primers were used to amplify a Nocardia genus-specific 598-bp fragment of 16S rRNA.Results: Nineteen samples (10.56%) were positive with PCR and 5 samples (2.78%) with conventional methods. All samples with positive cultures were also positive by PCR.Conclusion: The results of this study showed that PCR has a high sensitivity and accuracy for the detection of Nocardia compared with culture and biochemical tests. Considering the rapidity, precision, high sensitivity and specificity of molecular techniques, use of these techniques is suggested in conjunction with conventional methods for the detection of Nocardia phenotypes in clinical laboratories and research centers.http://journals.tums.ac.ir/PdfMed.aspx?pdf_med=/upload_files/pdf/19565.pdf&manuscript_id=19565Broncoalveolar LavageIdentificationCultureMolecular DiagnosisNocardia
collection DOAJ
language fas
format Article
sources DOAJ
author Eshraghi SS
Mardani N
Khalifehgholi M
Hosseini M
Mirhendi SH
Soori T
Heidarzadeh S
Saber S
Zarrinfar H
Ghasemi A
Pourmand MR
spellingShingle Eshraghi SS
Mardani N
Khalifehgholi M
Hosseini M
Mirhendi SH
Soori T
Heidarzadeh S
Saber S
Zarrinfar H
Ghasemi A
Pourmand MR
The Identification of Nocardia in BAL Specimens of Bronchoscopic Patients by Using Classical and Molecular Methods
Tehran University Medical Journal
Broncoalveolar Lavage
Identification
Culture
Molecular Diagnosis
Nocardia
author_facet Eshraghi SS
Mardani N
Khalifehgholi M
Hosseini M
Mirhendi SH
Soori T
Heidarzadeh S
Saber S
Zarrinfar H
Ghasemi A
Pourmand MR
author_sort Eshraghi SS
title The Identification of Nocardia in BAL Specimens of Bronchoscopic Patients by Using Classical and Molecular Methods
title_short The Identification of Nocardia in BAL Specimens of Bronchoscopic Patients by Using Classical and Molecular Methods
title_full The Identification of Nocardia in BAL Specimens of Bronchoscopic Patients by Using Classical and Molecular Methods
title_fullStr The Identification of Nocardia in BAL Specimens of Bronchoscopic Patients by Using Classical and Molecular Methods
title_full_unstemmed The Identification of Nocardia in BAL Specimens of Bronchoscopic Patients by Using Classical and Molecular Methods
title_sort identification of nocardia in bal specimens of bronchoscopic patients by using classical and molecular methods
publisher Tehran University of Medical Sciences
series Tehran University Medical Journal
issn 1683-1764
1735-7322
publishDate 2011-12-01
description Background: Nocardiosis is a rare and potentially life-threatening infection caused by several species of the Nocardia genus. The objective of this study was to develop and evaluate a rapid and new method to clinically identify relevant Nocardia species. Rapid and accurate diagnosis of Nocardia species is essential for the treatment of severe infections and prevention of cerebral abscess. Methods: One hundred and eighty patients, 103 (57.22%) male and 77 (42.78%) female, with severe symptomatic pulmonary infection were studied in the course of a 12-month period in Dr. Shariati Teaching Hospital affiliated to Tehran University of Medical Sciences in 2010. The specimens were cultured and identified using microbiological and biochemical tests. Polymerase chain reaction (PCR) was used to directly identify the organism in the broncoalveolar lavage samples collected from the patients. NG1 and NG2 primers were used to amplify a Nocardia genus-specific 598-bp fragment of 16S rRNA.Results: Nineteen samples (10.56%) were positive with PCR and 5 samples (2.78%) with conventional methods. All samples with positive cultures were also positive by PCR.Conclusion: The results of this study showed that PCR has a high sensitivity and accuracy for the detection of Nocardia compared with culture and biochemical tests. Considering the rapidity, precision, high sensitivity and specificity of molecular techniques, use of these techniques is suggested in conjunction with conventional methods for the detection of Nocardia phenotypes in clinical laboratories and research centers.
topic Broncoalveolar Lavage
Identification
Culture
Molecular Diagnosis
Nocardia
url http://journals.tums.ac.ir/PdfMed.aspx?pdf_med=/upload_files/pdf/19565.pdf&manuscript_id=19565
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