The RNase activity of endouc is involved in repressing the Human uORFchop- mediated Translational Inhibition during ER Stress
碩士 === 國立臺灣大學 === 分子與細胞生物學研究所 === 104 === The C/EBP homologous protein (CHOP), which determines that cells undergo apoptosis or survival, starts to be translated when cells encounter endoplasmic reticulum (ER) stress. It has been reported that the 5’UTR of chop mRNA contains an inhibitory upstream o...
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ndltd-TW-104NTU050611112017-05-07T04:26:42Z http://ndltd.ncl.edu.tw/handle/87986867524785380363 The RNase activity of endouc is involved in repressing the Human uORFchop- mediated Translational Inhibition during ER Stress endouc的RNase活性參與內質網壓力下由uORFchop所主導之轉譯抑制的分子機制 Ting-Ying Huang 黃亭穎 碩士 國立臺灣大學 分子與細胞生物學研究所 104 The C/EBP homologous protein (CHOP), which determines that cells undergo apoptosis or survival, starts to be translated when cells encounter endoplasmic reticulum (ER) stress. It has been reported that the 5’UTR of chop mRNA contains an inhibitory upstream open reading frame (uORFchop) which inhibits the translation of the downstream coding sequence (CDS) such as chop during normal condition. When cells encounter ER stress, this uORFchop–mediated translational inhibition (uORF-MTI) is repressed, resulting that the chop located at CDS in mRNA is translated. However, the molecular mechanism underlying uORFchop-MTI is still controversial. To understand the plausible mechanism involved in uORFchop-MTI, I employed the zebrafish transgenic line huORFZ, which harbors an exogenous DNA fragment that the CDS GFP cDNA fused with human uORFchop (huORFchop) and driven by a cytomegalovirus promoter. When huORFZ embryos were treated with heat-shock stress, GFP was exclusively expressed in the central nerve system. Employing laser-capture microdissection combined with microarray to compare the gene expression levels between GFP(+) brain cells and GFP(-) brain cells, we found that the endonuclease poly(U)-specific C gene (endouc) of zebrafish was significantly up-regulated in GFP(+) cells. Overexpression of endouc mRNA was able to repress uORF-MTI, resulting that GFP was expressed in the non-stressed huORFZ embryos. Moreover, the phosphorylation of eIF2α (p-eIF2α) and CHOP proteins were increased greatly in the endouc-overexpressive embryos (in vivo) and HEK293T cells (in vitro), indicating that endouc is involved in the repression of uORF-MTI. We proved that levels of many stress factors including Bip, p58IPK, and pPERK were not ectopic expression, suggesting that endouc overexpression per se did not induce ER stress intracellularly. To identify which domain of Endouc is involved in repression of uORF-MTI, I performed domain mapping and found a domain that contains amino acid residues between 137 and 299 is necessary for repression of uORF-MTI. Furthermore, I generated a single mutation of Endouc at H181 (EndoucH181A) and K242 (EndoucK242A), which disturb the endonuclease activity of Endouc, and found that overexpression of either endoucH181A or endoucK242A led to reduce the protein levels of p-eIF2α and CHOP. I also demonstrated that Endouc was able to enzymatically digest the huORF RNA fragment, while the mutant EndoucK242A was not, suggesting that the function of Endouc to disrupt uORF-MTI is depend on its endoribonuclease activity. Finally, using polysome profiling assay, I clearly demonstrated that, under stress condition, Endouc presented as a free protein and a 40S-80S associated complex. On contrast, the mutant EndoucK242A was always associated with polysomes, suggesting that Endouc was able to be released from polysomes under stress due to its RNase activity. Taken together, I hypothesize a model to explicit how Endouc plays role on the suppression of uORF-MTI: During ER stress, the RNase activity of Endouc might be triggered to digest the huORFchop motif located at 5''UTR of mRNA, resulting in a cap-independent mRNA, which in turn, the downstream CDS of CHOP cDNA is therefore reinitiated to translate through bypassing the hindrance of huORFchop structure. Furthermore, I found a positive feedback involved in suppression of uORF-MTI: the ectopic expression of Endouc enhances the eIF2α phosphorylation, which helps to disrupt the uORF-MTI, resulting in the increase of downstream CDS translation. Huai-Jen Tsai 蔡懷楨 2016 學位論文 ; thesis 66 zh-TW |
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碩士 === 國立臺灣大學 === 分子與細胞生物學研究所 === 104 === The C/EBP homologous protein (CHOP), which determines that cells undergo apoptosis or survival, starts to be translated when cells encounter endoplasmic reticulum (ER) stress. It has been reported that the 5’UTR of chop mRNA contains an inhibitory upstream open reading frame (uORFchop) which inhibits the translation of the downstream coding sequence (CDS) such as chop during normal condition. When cells encounter ER stress, this uORFchop–mediated translational inhibition (uORF-MTI) is repressed, resulting that the chop located at CDS in mRNA is translated. However, the molecular mechanism underlying uORFchop-MTI is still controversial. To understand the plausible mechanism involved in uORFchop-MTI, I employed the zebrafish transgenic line huORFZ, which harbors an exogenous DNA fragment that the CDS GFP cDNA fused with human uORFchop (huORFchop) and driven by a cytomegalovirus promoter. When huORFZ embryos were treated with heat-shock stress, GFP was exclusively expressed in the central nerve system. Employing laser-capture microdissection combined with microarray to compare the gene expression levels between GFP(+) brain cells and GFP(-) brain cells, we found that the endonuclease poly(U)-specific C gene (endouc) of zebrafish was significantly up-regulated in GFP(+) cells. Overexpression of endouc mRNA was able to repress uORF-MTI, resulting that GFP was expressed in the non-stressed huORFZ embryos. Moreover, the phosphorylation of eIF2α (p-eIF2α) and CHOP proteins were increased greatly in the endouc-overexpressive embryos (in vivo) and HEK293T cells (in vitro), indicating that endouc is involved in the repression of uORF-MTI. We proved that levels of many stress factors including Bip, p58IPK, and pPERK were not ectopic expression, suggesting that endouc overexpression per se did not induce ER stress intracellularly. To identify which domain of Endouc is involved in repression of uORF-MTI, I performed domain mapping and found a domain that contains amino acid residues between 137 and 299 is necessary for repression of uORF-MTI. Furthermore, I generated a single mutation of Endouc at H181 (EndoucH181A) and K242 (EndoucK242A), which disturb the endonuclease activity of Endouc, and found that overexpression of either endoucH181A or endoucK242A led to reduce the protein levels of p-eIF2α and CHOP. I also demonstrated that Endouc was able to enzymatically digest the huORF RNA fragment, while the mutant EndoucK242A was not, suggesting that the function of Endouc to disrupt uORF-MTI is depend on its endoribonuclease activity. Finally, using polysome profiling assay, I clearly demonstrated that, under stress condition, Endouc presented as a free protein and a 40S-80S associated complex. On contrast, the mutant EndoucK242A was always associated with polysomes, suggesting that Endouc was able to be released from polysomes under stress due to its RNase activity. Taken together, I hypothesize a model to explicit how Endouc plays role on the suppression of uORF-MTI: During ER stress, the RNase activity of Endouc might be triggered to digest the huORFchop motif located at 5''UTR of mRNA, resulting in a cap-independent mRNA, which in turn, the downstream CDS of CHOP cDNA is therefore reinitiated to translate through bypassing the hindrance of huORFchop structure. Furthermore, I found a positive feedback involved in suppression of uORF-MTI: the ectopic expression of Endouc enhances the eIF2α phosphorylation, which helps to disrupt the uORF-MTI, resulting in the increase of downstream CDS translation.
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author2 |
Huai-Jen Tsai |
author_facet |
Huai-Jen Tsai Ting-Ying Huang 黃亭穎 |
author |
Ting-Ying Huang 黃亭穎 |
spellingShingle |
Ting-Ying Huang 黃亭穎 The RNase activity of endouc is involved in repressing the Human uORFchop- mediated Translational Inhibition during ER Stress |
author_sort |
Ting-Ying Huang |
title |
The RNase activity of endouc is involved in repressing the Human uORFchop- mediated Translational Inhibition during ER Stress |
title_short |
The RNase activity of endouc is involved in repressing the Human uORFchop- mediated Translational Inhibition during ER Stress |
title_full |
The RNase activity of endouc is involved in repressing the Human uORFchop- mediated Translational Inhibition during ER Stress |
title_fullStr |
The RNase activity of endouc is involved in repressing the Human uORFchop- mediated Translational Inhibition during ER Stress |
title_full_unstemmed |
The RNase activity of endouc is involved in repressing the Human uORFchop- mediated Translational Inhibition during ER Stress |
title_sort |
rnase activity of endouc is involved in repressing the human uorfchop- mediated translational inhibition during er stress |
publishDate |
2016 |
url |
http://ndltd.ncl.edu.tw/handle/87986867524785380363 |
work_keys_str_mv |
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