Binding patterns of RNA-binding proteins to repeat-derived RNA sequences reveal putative functional RNA elements

Binding patterns of RNA-binding proteins to repeat-derived RNA sequences reveal putative functional RNA elements

Recent reports have revealed that repeat-derived sequences embedded in introns or long noncoding RNAs (lncRNAs) are targets of RNA-binding proteins (RBPs) and contribute to biological processes such as RNA splicing or transcriptional regulation. These findings suggest that repeat-derived RNAs are im...

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Bibliographic Details
Main Authors: Hamada, M. (Author), Matsumaru, A. (Author), Onoguchi, M. (Author), Zeng, C. (Author)
Format: Article
Language:English
Published: Oxford University Press 2021
Subjects:
3' untranslated region
Article
base pairing
binding affinity
complementary RNA
controlled study
gene expression
gene function
gene ontology
genome
Hep-G2 cell line
human
human cell
intron
K-562 cell line
liquid liquid phase separation
long interspersed nuclear element 1
long untranslated RNA
nucleotide
phase separation
polymerase chain reaction
protein RNA binding
protein secondary structure
RNA
RNA binding protein
RNA sequence
RNA structure
transposon
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