Personalized single-cell networks: a framework to predict the response of any gene to any drug for any patient

by Haripriya Harikumar, Thomas P. Quinn, Santu Rana, Sunil Gupta, Svetha Venkatesh
Published 2021-08-01

GenoVault: a cloud based genomics repository

by Sankalp Jain, Amit Saxena, Suprit Hesarur, Kirti Bhadhadhara, Neeraj Bharti, Sunitha Manjari Kasibhatla, Uddhavesh Sonavane, Rajendra Joshi
Published 2021-07-01

Machine-learning based feature selection for a non-invasive breathing change detection

by Juliana Alves Pegoraro, Sophie Lavault, Nicolas Wattiez, Thomas Similowski, Jésus Gonzalez-Bermejo, Etienne Birmelé
Published 2021-07-01

eQTpLot: a user-friendly R package for the visualization of colocalization between eQTL and GWAS signals

by Theodore G. Drivas, Anastasia Lucas, Marylyn D. Ritchie
Published 2021-07-01

Biological knowledge-slanted random forest approach for the classification of calcified aortic valve stenosis

by Erika Cantor, Rodrigo Salas, Harvey Rosas, Sandra Guauque-Olarte
Published 2021-07-01

Evaluating risk detection methods to uncover ontogenic-mediated adverse drug effect mechanisms in children

by Nicholas P. Giangreco, Nicholas P. Tatonetti
Published 2021-07-01

Comparison of 16S and whole genome dog microbiomes using machine learning

by Scott Lewis, Andrea Nash, Qinghong Li, Tae-Hyuk Ahn
Published 2021-08-01

Development and validation of a novel blending machine learning model for hospital mortality prediction in ICU patients with Sepsis

by Zhixuan Zeng, Shuo Yao, Jianfei Zheng, Xun Gong
Published 2021-08-01

Probability calibration-based prediction of recurrence rate in patients with diffuse large B-cell lymphoma

by Shuanglong Fan, Zhiqiang Zhao, Yanbo Zhang, Hongmei Yu, Chuchu Zheng, Xueqian Huang, Zhenhuan Yang, Meng Xing, Qing Lu, Yanhong Luo
Published 2021-08-01

Prediction of MoRFs based on sequence properties and convolutional neural networks

by Hao He, Yatong Zhou, Yue Chi, Jingfei He
Published 2021-08-01

New neural network classification method for individuals ancestry prediction from SNPs data

by H. Soumare, S. Rezgui, N. Gmati, A. Benkahla
Published 2021-06-01

A new pipeline for structural characterization and classification of RNA-Seq microbiome data

by Sebastian Racedo, Ivan Portnoy, Jorge I. Vélez, Homero San-Juan-Vergara, Marco Sanjuan, Eduardo Zurek
Published 2021-07-01

A prognostic model based on seven immune-related genes predicts the overall survival of patients with hepatocellular carcinoma

by Qian Yan, Wenjiang Zheng, Boqing Wang, Baoqian Ye, Huiyan Luo, Xinqian Yang, Ping Zhang, Xiongwen Wang
Published 2021-05-01

A maximum flow-based network approach for identification of stable noncoding biomarkers associated with the multigenic neurological condition, autism

by Maya Varma, Kelley M. Paskov, Brianna S. Chrisman, Min Woo Sun, Jae-Yoon Jung, Nate T. Stockham, Peter Y. Washington, Dennis P. Wall
Published 2021-05-01

DASSI: differential architecture search for splice identification from DNA sequences

by Shabir Moosa, Prof. Abbes Amira, Dr. Sabri Boughorbel
Published 2021-02-01

Performance of model-based multifactor dimensionality reduction methods for epistasis detection by controlling population structure

by Fentaw Abegaz, François Van Lishout, Jestinah M. Mahachie John, Kridsadakorn Chiachoompu, Archana Bhardwaj, Diane Duroux, Elena S. Gusareva, Zhi Wei, Hakon Hakonarson, Kristel Van Steen
Published 2021-02-01

Gene function finding through cross-organism ensemble learning

by Gianluca Moro, Marco Masseroli
Published 2021-02-01

A comparison of methods for interpreting random forest models of genetic association in the presence of non-additive interactions

by Alena Orlenko, Jason H. Moore
Published 2021-01-01

Mechanistic modeling of the SARS-CoV-2 disease map

by Kinza Rian, Marina Esteban-Medina, Marta R. Hidalgo, Cankut Çubuk, Matias M. Falco, Carlos Loucera, Devrim Gunyel, Marek Ostaszewski, María Peña-Chilet, Joaquín Dopazo
Published 2021-01-01

LightCUD: a program for diagnosing IBD based on human gut microbiome data

by Congmin Xu, Man Zhou, Zhongjie Xie, Mo Li, Xi Zhu, Huaiqiu Zhu
Published 2021-01-01