Article 13 bacterial gene nonhuman 13 controlled study 9 bacterial genome 5 bacterium isolate 5 antibiotic resistance 4 bacterial strain 4 bacterial virulence 4 phylogenetic tree 4 promoter region 4 transposon 4 Staphylococcus aureus 3 amikacin 3 antibiotic sensitivity 3 bacterium identification 3 gene expression 3 levofloxacin 3 tetracycline 3 unclassified drug 3 whole genome sequencing 3 RNA sequencing 2 Transcriptome 2 allele 2 amikacin resistance 2 aminoglycoside antibiotic agent 2 bacterial protein 2 bacterium mutant 2 biosynthesis 2 ciprofloxacin 2