Single cell biology—a Keystone Symposia report

by Alon, U., Arbel-Goren, R., Arekatla, G., Balzer, M.S, Cable, J., Cai, L., Domingos, A.I, Elowitz, M.B, Fan, J., Gaiti, F., Galloway, K.E, Garcia, H.G, Greenwald, N.F, Guilliams, M., Habib, N., Hamel, R., Hamidzada, H., Hong, C.K.Y, Itzkovitz, S., Junker, J.P, Keren, L., Klein, A.M, Liberali, P., Morris, S.A, Murray, J.I, Pfau, S.J, Quake, S.R, Raj, A., Ratz, M., Romeike, M., Rulands, S., Santos, S.D.M, Shalek, A.K, Spencer, S.L, Stergachis, A.B, Streets, A., Trapnell, C., Vento-Tormo, R., Wang, B., Whited, J., Yanai, I., Zhang, N.R
Published 2021

Programming cell growth into different cluster shapes using diffusible signals

by Brenner, M.P, Guo, Y., Nitzan, M.
Published 2021

Differential contribution to gene expression prediction of histone modifications at enhancers or promoters

by Ballaré, C., Beringer, M., Blanco, E., Di Croce, L., González-Ramírez, M., Mugianesi, F., Santanach, A.
Published 2021

Realistic retinal modeling unravels the differential role of excitation and inhibition to starburst amacrine cells in direction selectivity

by Amsalem, O., Ankri, L., Ezra-Tsur, E., Patil, P., Rivlin-Etzion, M., Segev, I.
Published 2021

Transcriptomic profiling in canines and humans reveals cancer specific gene modules and biological mechanisms common to both species

by Braisted, J., Breen, M., Gerhold, D., Grewal, G., LeBlanc, A.K, Mazcko, C., Sittampalam, G., Tawa, G.J
Published 2021

A detailed map of coupled circadian clock and cell cycle with qualitative dynamics validation

by Delaunay, F., Paulevé, L., Rougny, A., Teboul, M.
Published 2021

A Graph Feature Auto-Encoder for the prediction of unobserved node features on biological networks

by Hasibi, R., Michoel, T.
Published 2021

Quantitative model of eukaryotic Cdk control through the Forkhead CONTROLLER

by Barberis, M.
Published 2021

The major evolutionary transitions and codes of life

by Kun, Á
Published 2021

Networks of causal linkage between eigenmodes characterize behavioral dynamics of caenorhabditis elegans

by Agarwal, V., Bock, A.K, Goodridge, R., Lorimer, T., Rifkin, S.A, Saberski, E., Sugihara, G.
Published 2021

A spatio-temporal model to reveal oscillator phenotypes in molecular clocks: Parameter estimation elucidates circadian gene transcription dynamics in single-cells

by Brancaccio, M., Finkenstädt, B., Hastings, M., Johansen, A.M, Unosson, M.
Published 2021

HIV-1LAI Nef blocks the development of hematopoietic stem/progenitor cells into myeloid-erythroid lineage cells

by Chen, Q., Chen, X., Fu, X., Jiang, M., Liu, D., Xing, J., Zhang, X., Zou, S., Zou, W.
Published 2021

Assembly and Exploration of a Single Cell Atlas of the Drosophila Larval Ventral Cord. Identification of Rare Cell Types

by Brody, T., Choudhury, S.D, Nguyen, T.H, Serpe, M., Vicidomini, R.
Published 2021

GIPR Is Predominantly Localized to Nonadipocyte Cell Types Within White Adipose Tissue

by Baggio, L.L, Beaudry, J.L, Campbell, J.E, D'Alessio, D.A, Drucker, D.J, Gordon, A.N, Gribble, F.M, Reimann, F., Svendsen, B., Ussher, J.R, Wong, C.K
Published 2022

Biomedical Data Commons (BMDC) prioritizes B-lymphocyte non-coding genetic variants in Type 1 Diabetes

by Bhardwaj, P., Gaddam, S., Guha, R.V, Oro, A.E, Piekos, S.N, Radhakrishnan, P.
Published 2021

YY1 Regulates Glucose Homeostasis Through Controlling Insulin Transcription in Pancreatic β-Cells

by Chan, V.W, Cheng, K.K.Y, Chong, C.C.N, Liu, D., Lui, K.O, Wang, C.C, Wang, H., Yang, K.Y, Ye, W., Zhou, B.
Published 2022

Multiscale model of defective interfering particle replication for influenza A virus infection in animal cell culture

by Hein, M.D, Kupke, S.Y, Pelz, L., Reichl, U., Rüdiger, D.
Published 2021

MFSD4A inhibits the malignant progression of nasopharyngeal carcinoma by targeting EPHA2

by Gan, C., Jiang, W., Kong, X., Luo, Z., Qin, G., Yang, H., Zhang, R.
Published 2022

Irisin mediates beiging of adipose-derived mesenchymal stem cells through binding to TRPC3

by Ba, L., Gu, J., Han, Q., Li, X., Shen, Y., Sun, Z., Xue, C., Yang, Y., Zhao, R.C
Published 2022

Mouse and human antibodies bind HLA-E-leader peptide complexes and enhance NK cell cytotoxicity

by Alam, S.M, Azoitei, M.L, Barr, M., Borrow, P., Brackenridge, S., Cain, D.W, Edwards, R.J, Ferrari, G., Gillespie, G.M, Harlos, K., Haynes, B.F, Jones, E.Y, Li, D., McMichael, A.J, Mu, Z., Parks, R., Quastel, M., Rountree, W., Rozbesky, D., Saunders, K.O, Scearce, R.M, Swanson, O., Walters, L.C, Wang, Y., Wiehe, K.
Published 2022