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  1. 1
    MQF and buffered MQF: quotient filters for efficient storage of k-mers with their counts and metadata
    by Brown, C.T, Mansour, T.A, Shokrof, M.
    Published 2021
    Subjects: “...Data structures...”
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    Article
  2. 2
    Denoising large-scale biological data using network filters
    by Clauset, A., Kavran, A.J
    Published 2021
    Subjects: “...algorithm...”
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    Article
  3. 3
    Multi-view clustering by CPS-merge analysis with application to multimodal single-cell data
    by Li, J., Lin, L., Zhang, L.
    Published 2023
    Subjects: “...algorithm...”
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    Article
  4. 4
    Clustering of cancer data based on Stiefel manifold for multiple views
    by Tian, J., Zhao, J., Zheng, C.
    Published 2021
    Subjects: “...algorithm...”
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    Article
  5. 5
    Optimal dimensionality selection for independent component analysis of transcriptomic data
    Subjects: “...algorithm...”
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    Article
  6. 6
    The impact of graph construction scheme and community detection algorithm on the repeatability of community and hub identification in structural brain networks
    Subjects: “...algorithm...”
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    Article
  7. 7
    ConsAlign: simultaneous RNA structural aligner based on rich transfer learning and thermodynamic ensemble model of alignment scoring
    by Tagashira, M.
    Published 2023
    Subjects: “...algorithm...”
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    Article
  8. 8
    Active learning to classify macromolecular structures in situ for less supervision in cryo-electron tomography
    Subjects: “...algorithm...”
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    Article
  9. 9
    A drug repositioning algorithm based on a deep autoencoder and adaptive fusion
    by Bao, T., Chen, P., Liu, Z., Yu, X.
    Published 2021
    Subjects: “...algorithm...”
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    Article
  10. 10
    Fast protein structure comparison through effective representation learning with contrastive graph neural networks
    by Feng, S.-H, Pan, X., Shen, H.-B, Xia, C., Xia, Y.
    Published 2022
    Subjects: “...algorithm...”
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    Article
  11. 11
    Regularized matrix data clustering and its application to image analysis
    Subjects: “...algorithm...”
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    Article
  12. 12
    LLAMA: a robust and scalable machine learning pipeline for analysis of large scale 4D microscopy data: analysis of cell ruffles and filopodia
    Subjects: “...algorithm...”
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    Article
  13. 13
    Sparse data embedding and prediction by tropical matrix factorization
    Subjects: “...algorithm...”
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    Article
  14. 14
    qc3C: Reference-free quality control for Hi-C sequencing data
    by Darling, A.E, DeMaere, M.Z
    Published 2021
    Subjects: “...algorithm...”
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    Article
  15. 15
    A data-informed mean-field approach to mapping of cortical parameter landscapes
    by Lin, K.K, Xiao, Z.-C, Young, L.-S
    Published 2021
    Subjects: “...algorithm...”
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    Article
  16. 16
    A Bayesian approach to restricted latent class models for scientifically structured clustering of multivariate binary outcomes
    Subjects: “...algorithm...”
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    Article
  17. 17
    SVExpress: identifying gene features altered recurrently in expression with nearby structural variant breakpoints
    by Chen, F., Creighton, C.J, Zhang, Y.
    Published 2021
    Subjects: “...algorithm...”
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    Article
  18. 18
    SSBER: removing batch effect for single-cell RNA sequencing data
    by Wang, F., Zhang, Y.
    Published 2021
    Subjects: “...algorithm...”
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    Article
  19. 19
    Propedia: a database for protein–peptide identification based on a hybrid clustering algorithm
    Subjects: “...algorithm...”
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    Article
  20. 20
    Reconstructing contact network structure and cross-immunity patterns from multiple infection histories
    by Alizon, S., Selinger, C.
    Published 2021
    Subjects: “...algorithm...”
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    Article
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