MicrobesOnline: an integrated portal for comparative and functional genomics

by Dehal, Paramvir S., Joachimiak, Marcin P., Price, Morgan N., Bates, John T., Baumohl, Jason K., Chivian, Dylan, Friedland, Greg D., Huang, Katherine H., Keller, Keith, Novichkov, Pavel S., Dubchak, Inna L., Alm, Eric J., Arkin, Adam P.
Published 2011

High-throughput functional genomics using CRISPR-Cas9

by Shalem, Ophir, Zhang, Feng, Sanjana, Neville
Published 2016

Integrated network analyses for functional genomic studies in cancer

by Fraenkel, Ernest, Wilson, Jennifer Lynn, Hemann, Michael, Lauffenburger, Douglas A
Published 2014

High-resolution interrogation of functional elements in the noncoding genome

by Fontanillas, P., Sanjana, Neville E, Wright, Jason, Zheng, Kaijie, Shalem, Ophir, Joung, Julia, Cheng, Chia-Wei, Regev, Aviv, Zhang, Feng
Published 2017

Functional Genomics Approach Identifies Novel Signaling Regulators of TGFα Ectodomain Shedding

by Kefaloyianni, Eirini, Harrison, Christina, Sabbisetti, Venkata S., Herrlich, Andreas, Wilson, Jennifer Lynn, Stopfer, Lauren Elizabeth, Fraenkel, Ernest, Lauffenburger, Douglas A
Published 2019

In vivo genome editing improves muscle function in a mouse model of Duchenne muscular dystrophy

by Nelson, C. E., Hakim, C. H., Ousterout, D. G., Thakore, P. I., Moreb, E. A., Rivera, R. M. C., Madhavan, S., Pan, X., Ran, F. A., Yan, W. X., Asokan, A., Duan, D., Gersbach, C. A., Zhang, Feng
Published 2017

A genome-scale in vivo loss-of-function screen identifies Phf6 as a lineage-specific regulator of leukemia cell growth

by Meacham, Corbin Elizabeth, Lawton, Lee N., Pritchard, Justin R., Ehrenberger, Tobias, Fenouille, Nina, Zuber, Johannes, Williams, Richard T., Young, Richard A., Soto Feliciano, Yadira Marie, Hemann, Michael, Joughin, Brian Alan
Published 2015

Mapping a functional cancer genome atlas of tumor suppressors in mouse liver using AAV-CRISPR-mediated direct in vivo screening

by Wang, Guangchuan, Chow, Ryan D., Ye, Lupeng, Guzman, Christopher D., Dai, Xiaoyun, Dong, Matthew B., Zhang, Feng, Platt, Randall Jeffrey, Chen, Sidi, Sharp, Phillip A.
Published 2018

Comparative genomic workflow

by Rajapakse, Jagath, Pooja, Chen, Chunxi, Ho, Sy-Loi
Published 2010

The future is now: single-cell genomics of bacteria and archaea

by Blainey, Paul C.
Published 2014

Genomic phenotyping of the essential and non-essential yeast genome detects novel pathways for alkylation resistance

by Svensson, J. Peter, Quiros Pesudo, Laia, Fry, Rebecca C., Adeleye, Yeyejide A., Carmichael, Paul, Samson, Leona D
Published 2011

Genomic phenotyping of the essential and non-essential yeast genome detects novel pathways for alkylation resistance

by Svensson, J. Peter, Quiros Pesudo, Laia, Fry, Rebecca C., Adeleye, Yeyejide A., Carmichael, Paul, Samson, Leona D
Published 2012

DNA phosphorothioation is widespread and quantized in bacterial genomes

by Wang, Lianrong, Chen, Shi, Vergin, Kevin L., Giovannoni, Stephen J., Chan, Simon W., DeMott, Michael S., Taghizadeh, Koli, Cordero Sanchez, Otto Xavier, Cutler, Michael Barry, Timberlake, Sonia, Alm, Eric J., Polz, Martin F., Pinhassi, Jarone, Deng, Zixin, Dedon, Peter C., Chan, Simon W.
Published 2011

Development and Applications of CRISPR-Cas9 for Genome Engineering

by Hsu, Patrick, Lander, Eric Steven, Zhang, Feng
Published 2017

Genome engineering using the CRISPR-Cas9 system

by Ran, F. Ann, Hsu, Patrick, Wright, Jason, Agarwala, Vineeta, Scott, David Arthur, Zhang, Feng
Published 2016

Improved vectors and genome-wide libraries for CRISPR screening

by Sanjana, Neville E, Shalem, Ophir, Zhang, Feng
Published 2017

Harnessing single-cell genomics to improve the physiological fidelity of organoid-derived cell types

by Szucs, Matthew J, Ammendolia, Dustin A, MacMullan, Melanie A, Rakoff-Nahoum, Seth, Mead, Benjamin Elliott, Ordovas-Montanes, Jose Manuel, Braun, Alexandra Provost, Levy, Lauren, Saluja, Prerna Bhargava, Yin, Xiaolei, Hughes, Travis K., Wadsworth, Marc Havens, Ahmad, Rushdy, Carr, Steven A, Langer, Robert S, Collins, James J., Shalek, Alexander K, Karp, Jeffrey Michael
Published 2018

Convergence of DNA methylation and phosphorothioation epigenetics in bacterial genomes

by Chen, Chao, Wang, Lianrong, Chen, Si, Wu, Xiaolin, Gu, Meijia, Chen, Xi, Jiang, Susu, Wang, Yunfu, Deng, Zixin, Chen, Shi, Dedon, Peter C
Published 2017

Genomic mining of prokaryotic repressors for orthogonal logic gates

by Tamsir, Alvin, Clancy, Kevin, Peterson, Todd, Stanton, Brynne C., Nielsen, Alec Andrew, Voigt, Christopher A.
Published 2015

CRISPR-based genomic tools for the manipulation of genetically intractable microorganisms

by Chavez, Alejandro, Collins, James J., Shapiro, Rebecca
Published 2018