Harmonizing model organism data in the Alliance of Genome Resources

by Alliance of Genome Resources Consortium
Published 2022

Untangling the genomics of noise-induced hearing loss and tinnitus: Contributions of Mus musculus and Homo sapiens

by Clifford, R.E, Hertzano, R., Ohlemiller, K.K
Published 2019

Genome-wide identification of associations between enhancer and alternative splicing in human and mouse

by Huang, J.-H, Liu, Y.-T, Shiau, C.-K, Tsai, H.-K
Published 2022

ProbC: joint modeling of epigenome and transcriptome effects in 3D genome

by Sefer, E.
Published 2022

NoRCE: non-coding RNA sets cis enrichment tool

by Nabi, A., Olgun, G., Tastan, O.
Published 2021

Genome-wide CRISPR screen identified Rad18 as a determinant of doxorubicin sensitivity in osteosarcoma

by Cao, Z., Du, M., Gu, J., Heng, W., Liu, C., Liu, N., Qian, J., Wang, Y., Wei, F., Xue, X., Yu, Z., Zhang, W., Zhang, Y., Zhou, C., Zhu, K.
Published 2022

Highly Efficient Microcell-Mediated Transfer of HACs Containing a Genomic Region of Interest into Mammalian Cells

by Kouprina, N., Larionov, V., Liskovykh, M.
Published 2021

MOET: a web-based gene set enrichment tool at the Rat Genome Database for multiontology and multispecies analyses

by Brodie, K., De Pons, J.L, Demos, W.M, Dwinell, M.R, Gibson, A.C, Hayman, G.T, Hill, M.L, Hoffman, M.J, Kaldunski, M.L, Kwitek, A.E, Lamers, L., Laulederkind, S.J.F, Lin, C.-W, Nalabolu, H.S, Smith, J.R, Thorat, K., Thota, J., Tutaj, M., Tutaj, M.A, Vedi, M., Wang, S.-J, Zacher, S.
Published 2022

Protection of nascent DNA at stalled replication forks is mediated by phosphorylation of RIF1 intrinsically disordered region

by Andrade, J.G, Andreani, M., Balasubramanian, S., Chait, B.T, Di Virgilio, M., Donaldson, A.D, Garzón, J., Hiraga, S.-I, Mertins, P., Popp, O., Rahjouei, A., Rosen, D.B, Saha, T., Sundaravinayagam, D., Zhang, W.
Published 2022

Annotation depth confounds direct comparison of gene expression across species

by Arat, S., Martin, M., Oziolor, E.
Published 2021

A Graph Feature Auto-Encoder for the prediction of unobserved node features on biological networks

by Hasibi, R., Michoel, T.
Published 2021

Chromosomal neighbourhoods allow identification of organ specific changes in gene expression

by Christensen, M.M, Hallikas, O., Jernvall, J., Renvoisé, E., Roy, R.D
Published 2021

Distinctive High Expression of Antiretroviral APOBEC3 Protein in Mouse Germinal Center B Cells

by Enya, T., Hakata, Y., Miyazawa, M., Mizuno, S., Nakao, S., Takahashi, S., Tsuji-Kawahara, S., Tsukamoto, T., Tsukimoto, S.
Published 2022

Effects of Wood Smoke Constituents on Mucin Gene Expression in Mice and Human Airway Epithelial Cells and on Nasal Epithelia of Subjects with a Susceptibility Gene Variant in Tp53

by Chu, H.W, Fort, S., McDonald, J., Mebratu, Y., Petersen, H., Tassew, D., Tesfaigzi, Y.
Published 2022

An Enhancer-Driven Stem Cell–Like Program Mediated by SOX9 Blocks Intestinal Differentiation in Colorectal Cancer

by Bala, P., Bass, A.J, Cejas, P., Duronio, G.N, Hebbar, P., Liang, X., Long, H.W, Sahgal, P., Sethi, N.S, Singh, H., Spisak, S., Xie, Y., Yang, Y., Zhang, Y.
Published 2022

Longitudinal neural connection detection using a ferritin-encoding adeno-associated virus vector and in vivo MRI method

by Cai, A., Lin, K., Manyande, A., Nie, B., Su, P., Thompson, G.J, Wang, J., Wu, J., Wu, Y., Xu, F., Zheng, N., Zhu, L.
Published 2021

Sex-Biased ZRSR2 Mutations in Myeloid Malignancies Impair Plasmacytoid Dendritic Cell Activation and Apoptosis

by Abdel-Wahab, O., Angelot-Delettre, F., Biichle, S., Booth, C.A.G, Buonamici, S., Cabal-Hierro, L., Chung, S.S, Garnache-Ottou, F., Ghandi, M., Griffin, G.K, Hammerman, P.S, Jardin, F., Kenyon, C.M, Kim, S.S, Koeffler, H.P, Konopleva, M., Lane, A.A, Li, J., Li, Y.Y, Louissaint, A., Jr, Lovitch, S.B, Madan, V., Morgan, E.A, Pemmaraju, N., Piccaluga, P.P, Seiler, M., Taylor, J., Togami, K., Weinstock, D.M, Yang, H.
Published 2022

Besca, a single-cell transcriptomics analysis toolkit to accelerate translational research

by Badi, L., Ebeling, M., Hatje, K., Julien-Laferriere, A., Kam-Thong, T., Kang, A.S.W, Mädler, S.C, Phan, M., Schmucki, R., Schwalie, P.C, Sonrel, A., Ulrich, E., Wyss, L., Zhang, J.D
Published 2021

Variants in ADD1 cause intellectual disability, corpus callosum dysgenesis, and ventriculomegaly in humans

by Bhoj, E.J, Brasch-Andersen, C., Brites, P., Bupp, C., Caluseriu, O., Costa, A.R, Fagerberg, C., Falk, M.J, Feng, I., Ganetzky, R.D, Hakonarson, H., Hansen, L.K, Hill, R.S, Hu, K., Kahle, K.T, Kang, B., Li, D., Muraresku, C.C, Neil, J.E, Pinto-Costa, R., Qi, C., Ruan, X., Sousa, M.M, Walsh, C.A, Zhang, X., Zhong, R.
Published 2022

YY1 Regulates Glucose Homeostasis Through Controlling Insulin Transcription in Pancreatic β-Cells

by Chan, V.W, Cheng, K.K.Y, Chong, C.C.N, Liu, D., Lui, K.O, Wang, C.C, Wang, H., Yang, K.Y, Ye, W., Zhou, B.
Published 2022