Sequence and functional analyses of Haemophilus spp. genomic islands

by Adegbola, R., Bentley, S., Crook, D.W, Dimopoulou, I.D, Elamin, A.R.E, Erwin, A., Ferguson, D.J.P, Harding, R.M, Harrison, A., Hood, D.W, Juhas, M., Mansfield, L., Mohd-Zain, Z., Munson, R.S, Power, P.M, Smith, A.

Genome-wide association study and functional validation implicates JADE1 in tauopathy

by Andrews, S.J, Attems, J., Ayalon, G., Beach, T.G, Bhangale, T., Borukov, V.Y, Bowles, K.R, Cairns, N.J, Casella, A., Cherry, J.D, Cobos, I., Cohen, H.T, Corrada, M.M, Cortes, E.P, Crary, J.F, Dangoor, D.K, de Paiva Lopes, K., Dickson, D.W, Farrell, K., Fischer, P., Flanagan, M.E, Franklin, E.E, Frosch, M.P, Frost, B., Fulton-Howard, B., Gandy, S., Gearing, M., Glass, J., Goate, A., Gonzalez, E.M, Graham, R.R, Han, N., Haroutunian, V., Hefti, M.M, Hof, P.R, Humphrey, J., Hunkapiller, J., Hyman, B.T, Iida, M.A, Kapoor, M., Kawas, C.H, Keene, C.D, Kim, S.H, Kofler, J., Kovacs, G.G, Latimer, C.S, Lee, E.B, Lutz, M.I, Mao, Q., Marcora, E., McKee, A.C, McMillan, C.T, Mesulam, M.-M, Metcalf, J., Montine, T.J, Murray, M.E, Nelson, P.T, Novikova, G., Otero-Garcia, M., Perrin, R.J, Pham, T., Poon, W., Purohit, D.P, Raj, T., Renton, A.E, Richardson, T.E, Rissman, R.A, Salehi, B., Sano, M., Schneider, J.A, Shuldberg, S., Sissoko, C.T, Stein, T.D, Tang, W., Teich, A.F, Trojanowski, J.Q, Troncoso, J.C, Udine, E., Vialle, R.A, Vonsattel, J.-P, Walker, J.M, Walsh, H., Weintraub, S., White III, C.L, Whitney, K., Wolk, D.A, Woltjer, R.L, Wong, G., Yu, L.
Published 2022

Emergence of novel cephalopod gene regulation and expression through large-scale genome reorganization

by Albertin, C.B, Bates, P.A, Clarence, T., Foster, J.S, Fu, X., Hoang, O.P, Kawaguchi, A., Nyholm, S.V, Ritschard, E.A, Schmidbaur, H., Simakov, O., Tanaka, E., Weissenbacher, A., Zimmermann, B.
Published 2022

Genome-wide identification of CK gene family suggests functional expression pattern against Cd2+ stress in Gossypium hirsutum L.

by Chen, C., Chen, X., Fan, Y., Guo, L., Han, M., Lu, X., Malik, W.A, Rui, C., Sun, L., Wang, D., Wang, J., Wang, J., Wang, Q., Wang, S., Xu, N., Ye, W., Zhang, H., Zhang, Y., Zhao, L.
Published 2021

Finding functional associations between prokaryotic virus orthologous groups: a proof of concept

by Dutilh, B.E, Pappas, N.
Published 2021

DELEAT: gene essentiality prediction and deletion design for bacterial genome reduction

by Garrote-Sánchez, E., Gil, R., Solana, J.
Published 2021

Highly Selective, CRISPR/Cas9-Mediated Isolation of Genes and Genomic Loci from Complex Genomes by TAR Cloning in Yeast

by Kim, J.-H, Kouprina, N., Larionov, V.
Published 2021

Genome doubling enabled the expansion of yeast vesicle traffic pathways

by Purkanti, R., Thattai, M.
Published 2022

SARS-Cov-2 ORF3a: Mutability and function

by Bianchi, M., Borsetti, A., Ciccozzi, M., Pascarella, S.
Published 2021

Structure-aware mycobacterium tuberculosis functional annotation uncloaks resistance, metabolic, and virulence genes

by Baughn, A.D, Chan, C.K, Dhillon, N., Dillon, N.A, Elghraoui, A., Gunasekaran, D., Kuo, N., Modlin, S.J, Robinhold, C., Valafar, F., Zlotnicki, A.M
Published 2021

Genome-scale CRISPR screens identify host factors that promote human coronavirus infection

by Bluhm, A.P, Grodzki, M., Karst, S.M, Norris, M.H, Rafiee, R., Russo, M., Schaefer, M., Sobh, A., Tagmount, A., Vulpe, C.D
Published 2022

Functional characterisation of the amyotrophic lateral sclerosis risk locus GPX3/TNIP1

by Bye, C.R, Cheng, F.-F, Garton, F.C, Giacomotto, J., Gusev, A., Henders, A.K, Henderson, R.D, Kabashi, E., Kiernan, M.C, Mathers, S., McCombe, P.A, McRae, A.F, Nabais, M.F, Needham, M., Ngo, S.T, Ophoff, R., Qi, T., Restuadi, R., Schultz, D., Steyn, F.J, Thompson, M.J, Turner, B.J, van den Berg, L.H, van Rheenen, W., Veldink, J.H, Wallace, L., Wray, N.R, Wu, Y., Zaitlen, N., Ziser, L.
Published 2022

Anopheles mosquitoes reveal new principles of 3D genome organization in insects

by Belokopytova, P., Feron, R., Fishman, V., Liang, J., Lukyanchikova, V., Mao, C., Nuriddinov, M., Reijnders, M.J.M.F, Ruzzante, L., Sharakhov, I.V, Taskina, A., Tu, Z., Waterhouse, R.M, Wu, Y.
Published 2022

Anopheles mosquitoes reveal new principles of 3D genome organization in insects

by Belokopytova, P., Feron, R., Fishman, V., Liang, J., Lukyanchikova, V., Mao, C., Nuriddinov, M., Reijnders, M.J.M.F, Ruzzante, L., Sharakhov, I.V, Taskina, A., Tu, Z., Waterhouse, R.M, Wu, Y.
Published 2022

DIAMOND+MEGAN: Fast and Easy Taxonomic and Functional Analysis of Short and Long Microbiome Sequences

by Bağcı, C., Huson, D.H, Patz, S.
Published 2021

Genome-wide identification of associations between enhancer and alternative splicing in human and mouse

by Huang, J.-H, Liu, Y.-T, Shiau, C.-K, Tsai, H.-K
Published 2022

Accurate annotation of protein coding sequences with IDTAXA

by Cooley, N.P, Wright, E.S
Published 2021

Baseline gut metagenomic functional gene signature associated with variable weight loss responses following a healthy lifestyle intervention in humans

by Diener, C., Gibbons, S.M, Hood, L., Lovejoy, J.C, Magis, A.T, Patwardhan, S., Price, N.D, Qin, S., Tang, L., Zhou, Y.
Published 2021

Temperate and chronic virus competition leads to low lysogen frequency

by Clifton, S.M, Rapti, Z., Whitaker, R.J
Published 2021

CoxBase: an Online Platform for Epidemiological Surveillance, Visualization, Analysis, and Typing of Coxiella burnetii Genomic Sequences

by Dandekar, T., Fasemore, A.M, Förstner, K.U, Frangoulidis, D., Helbich, A., Vergnaud, G., Walter, M.C
Published 2021