A phylogenetic approach for weighting genetic sequences

by Alekseyenko, A.V, Coleman-Smith, W.J, De Maio, N., Goldman, N., Pardi, F., Suchard, M.A, Tamuri, A.U, Truszkowski, J.
Published 2021

Genetic dissection of complex traits using hierarchical biological knowledge

by Ideker, T., Kreisberg, J.F, Tanaka, H.
Published 2021

Shared genetic and epigenetic mechanisms between chronic periodontitis and oral squamous cell carcinoma

by Acharya, A., Deng, Y., Haak, R., Hu, X., Li, H., Li, S., Liu, X., Pan, H., Savkovic, V., Schmalz, G., Schmidt, J., Shang, R., Shang, W., Wu, N., Xu, C., Yu, Y., Zhou, Y., Ziebolz, D.
Published 2018

Genetic analysis of 39 erythrocytosis and hereditary hemochromatosis-associated genes in the Slovenian family with idiopathic erythrocytosis

by Anžej Doma, S., Debeljak, N., Fink, M., Gašperšič, J., Količ, R., Kristan, A., Kunej, T., Pajič, T., Podgornik, H., Preložnik Zupan, I., Režen, T., Vuga, A., Žula, Š
Published 2021

Biomedical Data Commons (BMDC) prioritizes B-lymphocyte non-coding genetic variants in Type 1 Diabetes

by Bhardwaj, P., Gaddam, S., Guha, R.V, Oro, A.E, Piekos, S.N, Radhakrishnan, P.
Published 2021

Constructing gene regulatory networks using epigenetic data

by DeMeo, D.L, Glass, K., Quackenbush, J., Sonawane, A.R
Published 2021

Rare coding variants in 35 genes associate with circulating lipid levels—A multi-ancestry analysis of 170,000 exomes

by Aguilar-Salinas, C.A, AMP-T2D-GENES, Myocardial Infarction Genetics Consortium, Antonacci-Fulton, L., Ardissino, D., Arnett, D.K, Aslibekyan, S., Atzmon, G., Ballantyne, C.M, Barajas-Olmos, F., Barzilai, N., Becker, L.C, Bielak, L.F, Bis, J.C, Blangero, J., Boehnke, M., Boerwinkle, E., Bonnycastle, L.L, Bottinger, E., Bowden, D.W, Bown, M.J, Brody, J.A, Broome, J.G, Burtt, N.P, Cade, B.E, Centeno-Cruz, F., Chaffin, M.D, Chan, E., Chang, Y.-C, Chen, Y.-D.I, Cheng, C.-Y, Choi, W.J, Chowdhury, R., Contreras-Cubas, C., Córdova, E.J, Correa, A., Cupples, L.A, Curran, J.E, Danesh, J., de Vries, P.S, DeFronzo, R.A, Doddapaneni, H., Dornbos, P., Duggirala, R., Dutcher, S.K, Ellinor, P.T, Emery, L.S, Flannick, J.A, Florez, J.C, Fornage, M., Freedman, B.I, Fuster, V., Garay-Sevilla, M.E, García-Ortiz, H., Germer, S., Gibbs, R.A, Gieger, C., Glaser, B., Gonzalez, C., Gonzalez-Villalpando, M.E, Graff, M., Graham, S.E, Grarup, N., Groop, L.C, Guo, X., Gupta, N., Han, S., Hanis, C.L, Hansen, T., He, J., Heard-Costa, N.L, Hindy, G., Hung, Y.-J, Hwang, M.Y, Irvin, M.R, Islas-Andrade, S., Jarvik, G.P, Kang, H.M, Kardia, S.L.R, Kathiresan, S., Kelly, T., Kenny, E.E, Khan, A.T, Khera, A.V, Kim, B.-J, Kim, R.W, Kim, Y.J, Koistinen, H.A, Kooperberg, C., Kuusisto, J., Kwak, S.H, Laakso, M., Lange, L.A, Lee, J., Lee, J., Lee, S., Lehman, D.M, Lemaitre, R.N, Linneberg, A., Liu, D.J, Liu, J., Loos, R.J.F, Lubitz, S.A, Lyssenko, V., Ma, R.C.W, Martin, L.W, Martínez-Hernández, A., Mathias, R.A, McCarthy, M.I, McGarvey, S.T, McPherson, R., Meigs, J.B, Meitinger, T., Melander, O., Mendoza-Caamal, E., Metcalf, G.A, Mi, X., Mohlke, K.L, Montasser, M.E, Moon, J.-Y, Moreno-Macías, H., Morrison, A.C, Muzny, D.M, Natarajan, P., Nelson, S.C, NHLBI TOPMed Lipids Working Group, NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium, Nilsson, P.M, O'Connell, J.R, Orho-Melander, M., Orozco, L., Palmer, C.N.A, Palmer, N.D, Park, C.J, Park, J., Park, K.S, Pedersen, O., Peloso, G.M, Peralta, J.M, Peyser, P.A, Post, W.S, Preuss, M., Psaty, B.M, Qi, Q., Rader, D.J, Rao, D.C, Redline, S., Reiner, A.P, Revilla-Monsalve, C., Rich, S.S, Rotter, J.I, Samani, N., Schunkert, H., Schurmann, C., Selvaraj, M.S, Seo, D., Seo, J.-S, Sim, X., Sladek, R., Small, K.S, So, W.Y, Stilp, A.M, Tai, E.S, Tam, C.H.T, Taylor, K.D, Teo, Y.Y, Thameem, F., Tomlinson, B., Tsai, M.Y, Tuomi, T., Tuomilehto, J., Tusié-Luna, T., Udler, M.S, van Dam, R.M, Vasan, R.S, Viaud Martinez, K.A, Wang, F.F, Wang, M., Wang, X., Watkins, H., Weeks, D.E, Willer, C.J, Wilson, J.G, Witte, D.R, Wong, T.-Y, Yanek, L.R, Zhang, D.
Published 2022

Crowdsourcing biocuration: The Community Assessment of Community Annotation with Ontologies (CACAO)

by Ades, S., Aleksander, S.A, Bennett, J.A, Berardini, T.Z, Brady, S., Britton, R., Carbon, S., Caruso, S.M, Clements, D., Dalia, R., Defelice, M., Doyle, E.L, Erill, I., Farrar, S., Friedberg, I., Gill, J.J, Gurney, S.M.R, Hu, J.C, Hughes, L., Johnson, A., Kowalski, J.M, LaBonte, S., Li, D., Liles, N., Lovering, R.C, Mans, T.L, McCarthy, F., McIntosh, B., Moore, S.D, Murphy, R., Paustian, T.D, Perdue, S., Peterson, C.N, Prüß, B.M, Ramsey, J., Renfro, D., Ross, C., Saha, M.S, Sheehy, R.R, Siegele, D.A, Tansey, J.T, Temple, L., Thorman, A.W, Trevino, S., Vollmer, A.C, Walbot, V., Willey, J., Zweifel, A.E
Published 2021

Mutational screening through comprehensive bioinformatics analysis to detect novel germline mutations in the APC gene in patients with familial adenomatous polyposis (FAP)

by Bagherian, H., Ghadamyari, F., Ghasemi, F., Heidari, M.M, Khatami, M., Merat, S., Rejali, L., Zeinali, S.
Published 2021

Evolution of phenotypic fluctuation under host-parasite interactions

by Kaneko, K., Nishiura, N.
Published 2021

Set-theory based benchmarking of three different variant callers for targeted sequencing

by Molina-Mora, J.A, Solano-Vargas, M.
Published 2021

Evidence from simulation studies for selective constraints on the codon usage of the Angiosperm psbA gene

by Ashok, T., Barrett, J., Kalkus, A., Morton, B.R
Published 2021

Recursive MAGUS: Scalable and accurate multiple sequence alignment

by Smirnov, V.
Published 2021

A data-driven approach for constructing mutation categories for mutational signature analysis

by Gilad, G., Leiserson, M.D.M, Sharan, R.
Published 2021

GCAEMDA: Predicting miRNA-disease associations via graph convolutional autoencoder

by Ji, C.-M, Li, L., Ni, J.-C, Su, Y.-S, Wang, Y.-T, Zheng, C.-H
Published 2021

GRAFIMO: Variant and haplotype aware motif scanning on pangenome graphs

by Bonnici, V., Garrison, E., Giugno, R., Pinello, L., Tognon, M.
Published 2021

MGEnrichment: A web application for microglia gene list enrichment analysis

by Ciernia, A.V, Jao, J.
Published 2021

RgCop-A regularized copula based method for gene selection in single cell rna-seq data

by Bandyopadhyay, S., Lall, S., Ray, S.
Published 2021

GPRuler: Metabolic gene-protein-reaction rules automatic reconstruction

by Damiani, C., Filippo, M.D, Pescini, D.
Published 2021

Identifying proximal RNA interactions from cDNA-encoded crosslinks with ShapeJumper

by Christy, T.W, Giannetti, C.A, Laederach, A., Weeks, K.M
Published 2021