Metabolic limits on classical information processing by biological cells

by Fields, C., Levin, M.
Published 2021

Data-driven biological network alignment that uses topological, sequence, and functional information

by Gu, S., Milenković, T.
Published 2021

FunOrder: A robust and semi-automated method for the identification of essential biosynthetic genes through computational molecular co-evolution

by Derntl, C., Mach, R.L, Mach-Aigner, A.R, Schaffer, D., Vignolle, G.A, Zehetner, L.
Published 2021

Assessment of software methods for estimating protein-protein relative binding affinities

by Barnes, J.E, Gonzalez, T.R, Martin, K.P, Patel, J.S, Ytreberg, F.M
Published 2021

A protocol to assess cellular bioenergetics in flavivirus-infected cells

by Chan, K.R, Low, J.Z.H, Ooi, E.E, Tan, H.C, Yau, C., Zhang, S.L.X
Published 2022

How does molecular taxonomy for deriving river health indices correlate with traditional morphological taxonomy?

by Besley, C.H, Cassidy, M., Dafforn, K.A, Greenfield, P., Murphy, N.P, Shackleton, M.E
Published 2021

The method utilized to purify the SARS-CoV-2 N protein can affect its molecular properties

by Dobrucki, J., Greb-Markiewicz, B., Kolonko-Adamska, M., Ożyhar, A., Tarczewska, A., Zarębski, M.
Published 2021

Discrete mechanical model of lamellipodial actin network implements molecular clutch mechanism and generates arcs and microspikes

by Rutkowski, D.M, Vavylonis, D.
Published 2021

Graph-based relevancy-redundancy gene selection method for cancer diagnosis

by Azadifar, S., Berahmand, K., Moradi, P., Oussalah, M., Rostami, M.
Published 2022

A Graph Feature Auto-Encoder for the prediction of unobserved node features on biological networks

by Hasibi, R., Michoel, T.
Published 2021

DECONbench: a benchmarking platform dedicated to deconvolution methods for tumor heterogeneity quantification

by Armenoult, L., Arnaud, A., Ayadi, M., Baurès, A., Blum, Y., Cros, J., de Reyniès, A., Decamps, C., Escalera, S., Guyon, I., HADACA consortium, Nicolle, R., Petitprez, F., Richard, M., Tomasini, R.
Published 2021

Predicting biological pathways of chemical compounds with a profile-inspired approach

by Chagoyen, M., Lopez-Ibañez, J., Pazos, F.
Published 2021

Context-aware multi-token concept recognition of biological entities

by Kim, K., Lee, D.
Published 2021

KinOrtho: a method for mapping human kinase orthologs across the tree of life and illuminating understudied kinases

by Byrne, D.P, Eyers, P.A, Gravel, N., Huang, L.-C, Kannan, N., Taujale, R., Venkat, A., Yeung, W.
Published 2021

dGPredictor: Automated fragmentation method for metabolic reaction free energy prediction and de novo pathway design

by Maranas, C.D, Upadhyay, V., Wang, L.
Published 2021

Inter-laboratory Validation of an HPLC–MS/MS Method for the Detection of Microbial Transglutaminase in Meat and Meat Products

by Becker, R., Behnke, T., Brockmeyer, J., Frost, K., Hiller, E., Jira, W., Möllers, M., Niedzwiecka, A., Pöpping, B., Uhlig, S., Weidner, M., Wittke, S.
Published 2022

Activating cryptic biosynthetic gene cluster through a CRISPR-Cas12a-mediated direct cloning approach

by Bai, L., Karthik, L., Liang, M., Liu, J., Liu, L., Liu, X., Tan, G.-Y, Tong, Y., Wang, R., Wang, S., Wang, W., Wu, M., Xu, F., Yang, J., Yang, Z., Zeng, X., Zhang, L.-X, Zhu, G.
Published 2022

TrancriptomeReconstructoR: data-driven annotation of complex transcriptomes

by Ivanov, M., Marquardt, S., Sandelin, A.
Published 2021

Reassessment of miRNA variant (isomiRs) composition by small RNA sequencing

by Aparicio-Puerta, E., Gómez-Martín, C., Hackenberg, M., Medina, J.M, Pegtel, D.M, van Eijndhoven, M.A.J
Published 2023

Wide-Geographic and Long-Term Analysis of the Role of Pathogens in the Decline of Pinna nobilis to Critically Endangered Species

by Álvarez, E., Catanese, G., Čižmek, H., Deudero, S., Follana-Berná, G., García-March, J.R, Grau, A., Hansjosten, B., Issaris, Y., Katharios, P., Lopez-Sanmartín, M., Morage, T., Navas, J.I, Nebot-Colomer, E., Pavloudi, C., Peyran, C., Planes, S., Prado, P., Sarafidou, G., Tena-Medialdea, J., Tüney-Kizilkaya, I., Valencia, J.M, Vázquez-Luis, M., Villalba, A.
Published 2022