Data-driven biological network alignment that uses topological, sequence, and functional information

by Gu, S., Milenković, T.
Published 2021

A systems biology model of junctional localization and downstream signaling of the Ang–Tie signaling pathway

by Annex, B.H, Kontos, C.D, Popel, A.S, Zhang, Y.
Published 2021

Activating cryptic biosynthetic gene cluster through a CRISPR-Cas12a-mediated direct cloning approach

by Bai, L., Karthik, L., Liang, M., Liu, J., Liu, L., Liu, X., Tan, G.-Y, Tong, Y., Wang, R., Wang, S., Wang, W., Wu, M., Xu, F., Yang, J., Yang, Z., Zeng, X., Zhang, L.-X, Zhu, G.
Published 2022

Molecular mechanism of proton-coupled ligand translocation by the bacterial efflux pump EmrE

by Bagiński, M., Czub, J., Jurasz, J., Wieczór, M.
Published 2021

Transcriptomic profiling in canines and humans reveals cancer specific gene modules and biological mechanisms common to both species

by Braisted, J., Breen, M., Gerhold, D., Grewal, G., LeBlanc, A.K, Mazcko, C., Sittampalam, G., Tawa, G.J
Published 2021

Conditional prediction of consecutive tumor evolution using cancer progression models: What genotype comes next?

by Diaz-Colunga, J., Diaz-Uriarte, R.
Published 2021

Molecular species selectivity of lipid transport creates a mitochondrial sink for di-unsaturated phospholipids

by Bao, X., Bierhuizen, A.S, Brouwers, J.F, Cox, R.C, de Kroon, A.I.P.M, De Smet, C.H, Ejsing, C.S, Ewing, T.A, Hermansson, M., Hokken, M.W.J, Ma, X., Renne, M.F, Sprenger, R.R
Published 2022

Rare-event sampling analysis uncovers the fitness landscape of the genetic code

by Furusawa, C., Omachi, Y., Saito, N.
Published 2023

FunOrder: A robust and semi-automated method for the identification of essential biosynthetic genes through computational molecular co-evolution

by Derntl, C., Mach, R.L, Mach-Aigner, A.R, Schaffer, D., Vignolle, G.A, Zehetner, L.
Published 2021

Crowdsourcing biocuration: The Community Assessment of Community Annotation with Ontologies (CACAO)

by Ades, S., Aleksander, S.A, Bennett, J.A, Berardini, T.Z, Brady, S., Britton, R., Carbon, S., Caruso, S.M, Clements, D., Dalia, R., Defelice, M., Doyle, E.L, Erill, I., Farrar, S., Friedberg, I., Gill, J.J, Gurney, S.M.R, Hu, J.C, Hughes, L., Johnson, A., Kowalski, J.M, LaBonte, S., Li, D., Liles, N., Lovering, R.C, Mans, T.L, McCarthy, F., McIntosh, B., Moore, S.D, Murphy, R., Paustian, T.D, Perdue, S., Peterson, C.N, Prüß, B.M, Ramsey, J., Renfro, D., Ross, C., Saha, M.S, Sheehy, R.R, Siegele, D.A, Tansey, J.T, Temple, L., Thorman, A.W, Trevino, S., Vollmer, A.C, Walbot, V., Willey, J., Zweifel, A.E
Published 2021

Fission stories: using PomBase to understand Schizosaccharomyces pombe biology

by Bähler, J., Harris, M.A, Hayles, J., Lock, A., Mata, J., Oliver, S.G, Rutherford, K.M, Wood, V.
Published 2022

Multilayer modelling of the human transcriptome and biological mechanisms of complex diseases and traits

by Azevedo, T., Dimitri, G.M, Gamazon, E.R, Lió, P.
Published 2021

A highly multiplexed quantitative phosphosite assay for biology and preclinical studies

by Babur, O., Burgess, M., Carr, S.A, Forestier, D., Gillette, M.A, Golji, J., Jane-Valbuena, J., Jean Beltran, P.M, Keshishian, H., Krug, K., Kuhn, E., MacMullan, M.A, Mani, D.R, Marlow, S.E, McDonald, E.R., III, Melanson, R., Mundt, F., Olive, M.E, Porter, D.A, Rabasha, B., Rejtar, T., Robinson, M.L, Satpathy, S., Sellers, W.R, Specht, H., Todres, E., Wallace, L., Wang, K.
Published 2021

Mutation Study of Malaysian Patients with Ornithine Transcarbamylase Deficiency: Clinical, Molecular, and Bioinformatics Analyses of Two Novel Missense Mutations of the OTC Gene

by Ali, E.Z, Jusoh, S.A, Mohd Radzi, M.A, Ngu, L.H, Zakaria, Y.
Published 2018

Polymorphisms of potential drug resistant molecular markers in Plasmodium vivax from China–Myanmar border during 2008‒2017

by Chen, Q., Ji, X., Pan, Y., Wang, H., Wang, Z., Wang, Z., Wang, Z., Wei, C., Zhang, L.
Published 2022

Deciphering the molecular mechanism of the cancer formation by chromosome structural dynamics

by Chu, X., Wang, J.
Published 2021

Ancestral Flowering Plant Chromosomes and Gene Orders Based on Generalized Adjacencies and Chromosomal Gene Co-Occurrences

by Jin, L., Leebens-Mack, J.H, Sankoff, D., Xu, Q., Zhang, X., Zhang, Y., Zheng, C.
Published 2021

A systems genomics approach uncovers molecular associates of RSV severity

by Benoodt, L., Caserta, M.T, Chu, C.-Y, Corbett, A., Falsey, A.R, Gill, S.R, Grier, A., Holden-Wiltse, J., Mariani, T.J, McCall, M.N, Qiu, X., Slaunwhite, C., Thakar, J., Topham, D.J, Walsh, E.E, Wang, L.
Published 2021

Experimental and computational investigation of enzyme functional annotations uncovers misannotation in the EC 1.1.3.15 enzyme class

by Engqvist, M.K.M, Rembeza, E.
Published 2021

Molecular characterization, expression and functional analysis of yak IFITM3 gene

by Fu, F., Li, J., Wang, H., Wang, L., Zhang, L., Zheng, Y.
Published 2021