Search Results - Adam M. Feist
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Have you tried turning it off and on again? Oscillating selection to enhance fitness-landscape traversal in adaptive laboratory evolution experiments by Alexander C. Carpenter, Adam M. Feist, Fergus S.M. Harrison, Ian T. Paulsen, Thomas C. Williams
Published in Metabolic Engineering Communications (2023-12-01)Get full text
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Advancing the scale of synthetic biology via cross-species transfer of cellular functions enabled by iModulon engraftment by Donghui Choe, Connor A. Olson, Richard Szubin, Hannah Yang, Jaemin Sung, Adam M. Feist, Bernhard O. Palsson
Published in Nature Communications (2024-03-01)Get full text
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TCA cycle tailoring facilitates optimal growth of proton-pumping NADH dehydrogenase-dependent Escherichia coli by Nikita Goel, Stuti Srivastav, Arjun Patel, Akshay Shirsath, Tushar Ranjan Panda, Malay Patra, Adam M. Feist, Amitesh Anand
Published in Microbiology Spectrum (2023-12-01)Get full text
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A comprehensive genome‐scale reconstruction of Escherichia coli metabolism—2011 by Jeffrey D Orth, Tom M Conrad, Jessica Na, Joshua A Lerman, Hojung Nam, Adam M Feist, Bernhard Ø Palsson
Published in Molecular Systems Biology (2011-10-01)Get full text
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Constraint-based modeling of carbon fixation and the energetics of electron transfer in Geobacter metallireducens. by Adam M Feist, Harish Nagarajan, Amelia-Elena Rotaru, Pier-Luc Tremblay, Tian Zhang, Kelly P Nevin, Derek R Lovley, Karsten Zengler
Published in PLoS Computational Biology (2014-04-01)Get full text
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Acidithiobacillus ferrooxidans's comprehensive model driven analysis of the electron transfer metabolism and synthetic strain design for biomining applications by Miguel A. Campodonico, Daniela Vaisman, Jean F. Castro, Valeria Razmilic, Francesca Mercado, Barbara A. Andrews, Adam M. Feist, Juan A. Asenjo
Published in Metabolic Engineering Communications (2016-12-01)Get full text
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Adaptive laboratory evolution of Bacillus subtilis to overcome toxicity of lignocellulosic hydrolysate derived from Distiller's dried grains with solubles (DDGS) by Jasper L.S.P. Driessen, Josefin Johnsen, Ivan Pogrebnyakov, Elsayed T.T. Mohamed, Solange I. Mussatto, Adam M. Feist, Sheila I. Jensen, Alex T. Nielsen
Published in Metabolic Engineering Communications (2023-06-01)Get full text
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Causal mutations from adaptive laboratory evolution are outlined by multiple scales of genome annotations and condition-specificity by Patrick V. Phaneuf, James T. Yurkovich, David Heckmann, Muyao Wu, Troy E. Sandberg, Zachary A. King, Justin Tan, Bernhard O. Palsson, Adam M. Feist
Published in BMC Genomics (2020-07-01)Get full text
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Laboratory evolution of synthetic electron transport system variants reveals a larger metabolic respiratory system and its plasticity by Amitesh Anand, Arjun Patel, Ke Chen, Connor A. Olson, Patrick V. Phaneuf, Cameron Lamoureux, Ying Hefner, Richard Szubin, Adam M. Feist, Bernhard O. Palsson
Published in Nature Communications (2022-06-01)Get full text
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A genome‐scale metabolic reconstruction for Escherichia coli K‐12 MG1655 that accounts for 1260 ORFs and thermodynamic information by Adam M Feist, Christopher S Henry, Jennifer L Reed, Markus Krummenacker, Andrew R Joyce, Peter D Karp, Linda J Broadbelt, Vassily Hatzimanikatis, Bernhard Ø Palsson
Published in Molecular Systems Biology (2007-06-01)Get full text
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Genetic Determinants Enabling Medium-Dependent Adaptation to Nafcillin in Methicillin-Resistant <named-content content-type="genus-species">Staphylococcus aureus</named-content> by Michael J. Salazar, Henrique Machado, Nicholas A. Dillon, Hannah Tsunemoto, Richard Szubin, Samira Dahesh, Joseph Pogliano, George Sakoulas, Bernhard O. Palsson, Victor Nizet, Adam M. Feist
Published in mSystems (2020-04-01)Get full text
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Experimental Evolution Reveals Unifying Systems-Level Adaptations but Diversity in Driving Genotypes by Erol S. Kavvas, Christopher P. Long, Anand Sastry, Saugat Poudel, Maciek R. Antoniewicz, Yang Ding, Elsayed T. Mohamed, Richard Szubin, Jonathan M. Monk, Adam M. Feist, Bernhard O. Palsson
Published in mSystems (2022-12-01)Get full text
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Diagnosis and mitigation of the systemic impact of genome reduction in Escherichia coli DGF-298 by Antoine Champie, Jean-Christophe Lachance, Anand Sastry, Dominick Matteau, Colton J. Lloyd, Frédéric Grenier, Cameron R. Lamoureux, Simon Jeanneau, Adam M. Feist, Pierre-Étienne Jacques, Bernhard O. Palsson, Sébastien Rodrigue
Published in mBio (2024-10-01)Get full text
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