Search Results - Adam Shlien

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  1. 1

    131-I-MIBG therapy in combination with PARP inhibitors for young adult patient with relapsed neuroblastoma and DNA repair pathway alterations by Sarah Cohen-Gogo, Amer Shammas, Adam Shlien, Meredith Irwin, Daniel Morgenstern

    Published in EJC Paediatric Oncology (2024-06-01)
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  2. 2

    Long read nanopore sequencing for detection of HLA and CYP2D6 variants and haplotypes [v1; ref status: indexed, http://f1000r.es/4zj] by Ron Ammar, Tara A. Paton, Dax Torti, Adam Shlien, Gary D. Bader

    Published in F1000Research (2015-01-01)
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  3. 3

    A proteomic chronology of gene expression through the cell cycle in human myeloid leukemia cells by Tony Ly, Yasmeen Ahmad, Adam Shlien, Dominique Soroka, Allie Mills, Michael J Emanuele, Michael R Stratton, Angus I Lamond

    Published in eLife (2014-03-01)
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  4. 4

    A dataset of transcriptomic effects of camptothecin treatment on early zebrafish embryosGene Expression Omnibus by Sergey V. Prykhozhij, Kevin Ban, Zane L. Brown, Kim Kobar, Gabriel Wajnberg, Charlotte Fuller, Simi Chacko, Jacynthe Lacroix, Nicolas Crapoulet, Craig Midgen, Adam Shlien, David Malkin, Jason N. Berman

    Published in Data in Brief (2024-12-01)
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  5. 5

    TMBur: a distributable tumor mutation burden approach for whole genome sequencing by Emma Titmuss, Richard D. Corbett, Scott Davidson, Sanna Abbasi, Laura M. Williamson, Erin D. Pleasance, Adam Shlien, Daniel J. Renouf, Steven J. M. Jones, Janessa Laskin, Marco A. Marra

    Published in BMC Medical Genomics (2022-09-01)
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  6. 6

    DNA damage response deficiency enhances neuroblastoma progression and sensitivity to combination PARP and ATR inhibition by Madeline N. Hayes, Sarah Cohen-Gogo, Lynn Kee, Xueting Xiong, Alex Weiss, Mehdi Layeghifard, Yagnesh Ladumor, Ivette Valencia-Sama, Anisha Rajaselvam, David R. Kaplan, Anita Villani, Adam Shlien, Daniel A. Morgenstern, Meredith S. Irwin

    Published in Cell Reports (2025-04-01)
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  7. 7

    Cell-free DNA from germline TP53 mutation carriers reflect cancer-like fragmentation patterns by Derek Wong, Maha Tageldein, Ping Luo, Erik Ensminger, Jeffrey Bruce, Leslie Oldfield, Haifan Gong, Nicholas William Fischer, Brianne Laverty, Vallijah Subasri, Scott Davidson, Reem Khan, Anita Villani, Adam Shlien, Raymond H. Kim, David Malkin, Trevor J. Pugh

    Published in Nature Communications (2024-08-01)
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  8. 8

    Myeloproliferative Neoplasm Driven by <i>ETV6-ABL1</i> in an Adolescent with Recent History of Burkitt Leukemia by Samuele Renzi, Fatimah Algawahmed, Scott Davidson, Karin P. S. Langenberg, Fabio Fuligni, Salah Ali, Nathaniel Anderson, Ledia Brunga, Jack Bartram, Mohamed Abdelhaleem, Ahmed Naqvi, Kassa Beimnet, Andre Schuh, Anne Tierens, David Malkin, Adam Shlien, Mary Shago, Anita Villani

    Published in Current Oncology (2023-06-01)
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  9. 9

    A systematic assessment of the impact of rare canonical splice site variants on splicing using functional and in silico methods by Rachel Y. Oh, Ali AlMail, David Cheerie, George Guirguis, Huayun Hou, Kyoko E. Yuki, Bushra Haque, Bhooma Thiruvahindrapuram, Christian R. Marshall, Roberto Mendoza-Londono, Adam Shlien, Lianna G. Kyriakopoulou, Susan Walker, James J. Dowling, Michael D. Wilson, Gregory Costain

    Published in HGG Advances (2024-07-01)
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  10. 10

    Assessing the diagnostic impact of blood transcriptome profiling in a pediatric cohort previously assessed by genome sequencing by Huayun Hou, Kyoko E. Yuki, Gregory Costain, Anna Szuto, Sierra Barnes, Arun K. Ramani, Alper Celik, Michael Braga, Meagan Gloven-Brown, Dimitri J. Stavropoulos, Sarah Bowdin, Ronald D. Cohn, Roberto Mendoza-Londono, Stephen W. Scherer, Michael Brudno, Christian R. Marshall, M. Stephen Meyn, Adam Shlien, James J. Dowling, Michael D. Wilson, Lianna Kyriakopoulou

    Published in npj Genomic Medicine (2025-07-01)
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  11. 11

    Inter-chromosomal contacts demarcate genome topology along a spatial gradient by Milad Mokhtaridoost, Jordan J. Chalmers, Marzieh Soleimanpoor, Brandon J. McMurray, Daniella F. Lato, Son C. Nguyen, Viktoria Musienko, Joshua O. Nash, Sergio Espeso-Gil, Sameen Ahmed, Kate Delfosse, Jared W. L. Browning, A. Rasim Barutcu, Michael D. Wilson, Thomas Liehr, Adam Shlien, Samin Aref, Eric F. Joyce, Anja Weise, Philipp G. Maass

    Published in Nature Communications (2024-11-01)
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  12. 12

    Analysis of 100,000 human cancer genomes reveals the landscape of tumor mutational burden by Zachary R. Chalmers, Caitlin F. Connelly, David Fabrizio, Laurie Gay, Siraj M. Ali, Riley Ennis, Alexa Schrock, Brittany Campbell, Adam Shlien, Juliann Chmielecki, Franklin Huang, Yuting He, James Sun, Uri Tabori, Mark Kennedy, Daniel S. Lieber, Steven Roels, Jared White, Geoffrey A. Otto, Jeffrey S. Ross, Levi Garraway, Vincent A. Miller, Phillip J. Stephens, Garrett M. Frampton

    Published in Genome Medicine (2017-04-01)
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  13. 13

    An international working group consensus report for the prioritization of molecular biomarkers for Ewing sarcoma by David S. Shulman, Sarah B. Whittle, Didier Surdez, Kelly M. Bailey, Enrique de Álava, Jason T. Yustein, Adam Shlien, Masanori Hayashi, Alexander J. R. Bishop, Brian D. Crompton, Steven G. DuBois, Neerav Shukla, Patrick J. Leavey, Stephen L. Lessnick, Heinrich Kovar, Olivier Delattre, Thomas G. P. Grünewald, Cristina R. Antonescu, Ryan D. Roberts, Jeffrey A. Toretsky, Franck Tirode, Richard Gorlick, Katherine A. Janeway, Damon Reed, Elizabeth R. Lawlor, Patrick J. Grohar

    Published in npj Precision Oncology (2022-09-01)
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