Search Results - Alexander E. Lipka

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  1. 1

    The Use of Targeted Marker Subsets to Account for Population Structure and Relatedness in Genome-Wide Association Studies of Maize (Zea mays L.) by Angela H. Chen, Alexander E. Lipka

    Published in G3: Genes, Genomes, Genetics (2016-08-01)
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  2. 2

    Inhibition of ethylene involved in resistance to E. turcicum in an exotic-derived double haploid maize population by Sarah Lipps, Alexander E. Lipka, Santiago Mideros, Tiffany Jamann

    Published in Frontiers in Plant Science (2023-10-01)
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  3. 3

    Regularized multi-trait multi-locus linear mixed models for genome-wide association studies and genomic selection in crops by Aurélie C. Lozano, Hantian Ding, Naoki Abe, Alexander E. Lipka

    Published in BMC Bioinformatics (2023-10-01)
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  4. 4

    Crop modeling suggests limited transpiration would increase yield of sorghum across drought-prone regions of the United States by Rubí Raymundo, Greg Mclean, Sarah Sexton-Bowser, Alexander E. Lipka, Geoffrey P. Morris

    Published in Frontiers in Plant Science (2024-01-01)
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  5. 5

    An assessment of the performance of the logistic mixed model for analyzing binary traits in maize and sorghum diversity panels. by Esperanza Shenstone, Julian Cooper, Brian Rice, Martin Bohn, Tiffany M Jamann, Alexander E Lipka

    Published in PLoS ONE (2018-01-01)
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  6. 6

    Genomic Prediction of Single Crosses in the Early Stages of a Maize Hybrid Breeding Pipeline by Dnyaneshwar C. Kadam, Sarah M. Potts, Martin O. Bohn, Alexander E. Lipka, Aaron J. Lorenz

    Published in G3: Genes, Genomes, Genetics (2016-11-01)
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  7. 7

    Accuracy of Genomic Prediction of Yield and Sugar Traits in <i>Saccharum</i> spp. Hybrids by Md. S. Islam, Per McCord, Quentin D. Read, Lifang Qin, Alexander E. Lipka, Sushma Sood, James Todd, Marcus Olatoye

    Published in Agriculture (2022-09-01)
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  8. 8

    Regulatory variation controlling architectural pleiotropy in maize by Edoardo Bertolini, Brian R. Rice, Max Braud, Jiani Yang, Sarah Hake, Josh Strable, Alexander E. Lipka, Andrea L. Eveland

    Published in Nature Communications (2025-03-01)
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  9. 9

    Linkage Map Construction and Quantitative Trait Locus Analysis of Agronomic and Fiber Quality Traits in Cotton by Michael A. Gore, David D. Fang, Jesse A. Poland, Jinfa Zhang, Richard G. Percy, Roy G. Cantrell, Gregory Thyssen, Alexander E. Lipka

    Published in The Plant Genome (2014-03-01)
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  10. 10

    A first look at the ability to use genomic prediction for improving the ratooning ability of sugarcane by Md. Sariful Islam, Keo Corak, Per McCord, Per McCord, Amanda M. Hulse-Kemp, Amanda M. Hulse-Kemp, Alexander E. Lipka

    Published in Frontiers in Plant Science (2023-08-01)
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  11. 11

    GAPIT Version 2: An Enhanced Integrated Tool for Genomic Association and Prediction by You Tang, Xiaolei Liu, Jiabo Wang, Meng Li, Qishan Wang, Feng Tian, Zhongbin Su, Yuchun Pan, Di Liu, Alexander E. Lipka, Edward S. Buckler, Zhiwu Zhang

    Published in The Plant Genome (2016-07-01)
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  12. 12

    The regulatory landscape of early maize inflorescence development by Rajiv K. Parvathaneni, Edoardo Bertolini, Md Shamimuzzaman, Daniel L. Vera, Pei-Yau Lung, Brian R. Rice, Jinfeng Zhang, Patrick J. Brown, Alexander E. Lipka, Hank W. Bass, Andrea L. Eveland

    Published in Genome Biology (2020-07-01)
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  13. 13

    Time dependent genetic analysis links field and controlled environment phenotypes in the model C4 grass Setaria. by Max J Feldman, Rachel E Paul, Darshi Banan, Jennifer F Barrett, Jose Sebastian, Muh-Ching Yee, Hui Jiang, Alexander E Lipka, Thomas P Brutnell, José R Dinneny, Andrew D B Leakey, Ivan Baxter

    Published in PLoS Genetics (2017-06-01)
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  14. 14

    Field-Based High-Throughput Plant Phenotyping Reveals the Temporal Patterns of Quantitative Trait Loci Associated with Stress-Responsive Traits in Cotton by Duke Pauli, Pedro Andrade-Sanchez, A. Elizabete Carmo-Silva, Elodie Gazave, Andrew N. French, John Heun, Douglas J. Hunsaker, Alexander E. Lipka, Tim L. Setter, Robert J. Strand, Kelly R. Thorp, Sam Wang, Jeffrey W. White, Michael A. Gore

    Published in G3: Genes, Genomes, Genetics (2016-04-01)
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  15. 15

    Winter hardiness of Miscanthus (III): Genome‐wide association and genomic prediction for overwintering ability in Miscanthus sinensis by Hongxu Dong, Lindsay V. Clark, Alexander E. Lipka, Joe E. Brummer, Katarzyna Głowacka, Megan C. Hall, Kweon Heo, Xiaoli Jin, Junhua Peng, Toshihiko Yamada, Bimal Kumar Ghimire, Ji Hye Yoo, Chang Yeon Yu, Hua Zhao, Stephen P. Long, Erik J. Sacks

    Published in GCB Bioenergy (2019-08-01)
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  16. 16

    Genome‐wide association and genomic prediction for yield and component traits of Miscanthus sacchariflorus by Joyce N. Njuguna, Lindsay V. Clark, Alexander E. Lipka, Kossonou G. Anzoua, Larisa Bagmet, Pavel Chebukin, Maria S. Dwiyanti, Elena Dzyubenko, Nicolay Dzyubenko, Bimal Kumar Ghimire, Xiaoli Jin, Douglas A. Johnson, Hironori Nagano, Junhua Peng, Karen Koefoed Petersen, Andrey Sabitov, Eun Soo Seong, Toshihiko Yamada, Ji Hye Yoo, Chang Yeon Yu, Hua Zhao, Stephen P. Long, Erik J. Sacks

    Published in GCB Bioenergy (2023-11-01)
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  17. 17

    Training Population Optimization for Genomic Selection in Miscanthus by Marcus O. Olatoye, Lindsay V. Clark, Nicholas R. Labonte, Hongxu Dong, Maria S. Dwiyanti, Kossonou G. Anzoua, Joe E. Brummer, Bimal K. Ghimire, Elena Dzyubenko, Nikolay Dzyubenko, Larisa Bagmet, Andrey Sabitov, Pavel Chebukin, Katarzyna Głowacka, Kweon Heo, Xiaoli Jin, Hironori Nagano, Junhua Peng, Chang Y. Yu, Ji H. Yoo, Hua Zhao, Stephen P. Long, Toshihiko Yamada, Erik J. Sacks, Alexander E. Lipka

    Published in G3: Genes, Genomes, Genetics (2020-07-01)
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  18. 18

    Genotype by environment model predictive ability in Miscanthus by Sarah Widener, Joyce N. Njuguna, Lindsay V. Clark, Kossonou G. Anzoua, Larisa Bagmet, Pavel Chebukin, Maria S. Dwiyanti, Elena Dzyubenko, Nicolay Dzyubenko, Bimal Kumar Ghimire, Xiaoli Jin, Uffe Jørgensen, Jens Bonderup Kjeldsen, Hironori Nagano, Junhua Peng, Karen Koefoed Petersen, Andrey Sabitov, Eun Soo Seong, Toshihiko Yamada, Ji Hye Yoo, Chang Yeon Yu, Hua Zhao, Diego Jarquin, Erik Sacks, Alexander E. Lipka

    Published in GCB Bioenergy (2024-01-01)
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  19. 19

    Impact of genotype‐calling methodologies on genome‐wide association and genomic prediction in polyploids by Joyce N. Njuguna, Lindsay V. Clark, Alexander E. Lipka, Kossonou G. Anzoua, Larisa Bagmet, Pavel Chebukin, Maria S. Dwiyanti, Elena Dzyubenko, Nicolay Dzyubenko, Bimal Kumar Ghimire, Xiaoli Jin, Douglas A. Johnson, Jens Bonderup Kjeldsen, Hironori Nagano, Ivone deBem Oliveira, Junhua Peng, Karen Koefoed Petersen, Andrey Sabitov, Eun Soo Seong, Toshihiko Yamada, Ji Hye Yoo, Chang Yeon Yu, Hua Zhao, Patricio Munoz, Stephen P. Long, Erik J. Sacks

    Published in The Plant Genome (2023-12-01)
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  20. 20

    Current challenges and future of agricultural genomes to phenomes in the USA by Christopher K. Tuggle, Jennifer L. Clarke, Brenda M. Murdoch, Eric Lyons, Nicole M. Scott, Bedrich Beneš, Jacqueline D. Campbell, Henri Chung, Courtney L. Daigle, Sruti Das Choudhury, Jack C. M. Dekkers, Joao R. R. Dórea, David S. Ertl, Max Feldman, Breno O. Fragomeni, Janet E. Fulton, Carmela R. Guadagno, Darren E. Hagen, Andrew S. Hess, Luke M. Kramer, Carolyn J. Lawrence-Dill, Alexander E. Lipka, Thomas Lübberstedt, Fiona M. McCarthy, Stephanie D. McKay, Seth C. Murray, Penny K. Riggs, Troy N. Rowan, Moira J. Sheehan, Juan P. Steibel, Addie M. Thompson, Kara J. Thornton, Curtis P. Van Tassell, Patrick S. Schnable

    Published in Genome Biology (2024-01-01)
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