Search Results - Alexis Dereeper

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  1. 1

    Clustered Regularly Interspaced Short Palindromic Repeats in <i>Xanthomonas citri</i>—Witnesses to a Global Expansion of a Bacterial Pathogen over Time by Ninon Bellanger, Alexis Dereeper, Ralf Koebnik

    Published in Microorganisms (2022-08-01)
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  2. 2

    Inter-genomic DNA Exchanges and Homeologous Gene Silencing Shaped the Nascent Allopolyploid Coffee Genome (Coffea arabica L.) by Philippe Lashermes, Yann Hueber, Marie-Christine Combes, Dany Severac, Alexis Dereeper

    Published in G3: Genes, Genomes, Genetics (2016-09-01)
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  3. 3

    Shifting From Sectoral to Integrated Surveillance by Changing Collaborative Practices: Application to West Nile Virus Surveillance in a Small Island State of the Caribbean by Mariana Geffroy, Mariana Geffroy, Nonito Pagès, David Chavernac, Alexis Dereeper, Alexis Dereeper, Lydéric Aubert, Cecile Herrmann-Storck, Anubis Vega-Rúa, Sylvie Lecollinet, Jennifer Pradel, Jennifer Pradel

    Published in Frontiers in Public Health (2021-06-01)
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  4. 4

    Analyses of the Root-Knot Nematode (<i>Meloidogyne graminicola</i>) Transcriptome during Host Infection Highlight Specific Gene Expression Profiling in Resistant Rice Plants by Anne-Sophie Petitot, Alexis Dereeper, Corinne Da Silva, Julie Guy, Diana Fernandez

    Published in Pathogens (2020-08-01)
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  5. 5

    Intermediate Inheritance with Disomic Tendency in Tetraploid Intergeneric <i>Citrus × Poncirus</i> Hybrids Enhances the Efficiency of Citrus Rootstock Breeding by Leny Calvez, Alexis Dereeper, Pierre Mournet, Yann Froelicher, Saturnin Bruyère, Raphaël Morillon, Patrick Ollitrault

    Published in Agronomy (2020-12-01)
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  6. 6

    An improved method for TAL effectors DNA-binding sites prediction reveals functional convergence in TAL repertoires of Xanthomonas oryzae strains. by Alvaro L Pérez-Quintero, Luis M Rodriguez-R, Alexis Dereeper, Camilo López, Ralf Koebnik, Boris Szurek, Sebastien Cunnac

    Published in PLoS ONE (2013-01-01)
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  7. 7

    Transposable elements are a major cause of somatic polymorphism in Vitis vinifera L. by Grégory Carrier, Loïc Le Cunff, Alexis Dereeper, Delphine Legrand, François Sabot, Olivier Bouchez, Laurent Audeguin, Jean-Michel Boursiquot, Patrice This

    Published in PLoS ONE (2012-01-01)
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  8. 8

    The fly route of extended-spectrum-β-lactamase-producing Enterobacteriaceae dissemination in a cattle farm: from the ecosystem to the molecular scale by Alann Caderhoussin, David Couvin, Gaëlle Gruel, Isaure Quétel, Matthieu Pot, Rémy Arquet, Alexis Dereeper, Jean-Christophe Bambou, Antoine Talarmin, Séverine Ferdinand

    Published in Frontiers in Antibiotics (2024-04-01)
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  9. 9

    Meiotic Behaviors of Allotetraploid Citrus Drive the Interspecific Recombination Landscape, the Genetic Structures, and Traits Inheritance in Tetrazyg Progenies Aiming to Select Ne... by Lény Calvez, Alexis Dereeper, Aude Perdereau, Pierre Mournet, Maëva Miranda, Saturnin Bruyère, Barbara Hufnagel, Yann Froelicher, Arnaud Lemainque, Raphaël Morillon, Patrick Ollitrault

    Published in Plants (2023-04-01)
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  10. 10

    Naegleria genus pangenome reveals new structural and functional insights into the versatility of these free-living amoebae by Alexis Dereeper, Nina Allouch, Vincent Guerlais, Maëlle Garnier, Laurence Ma, Johan F. De Jonckheere, Sandeep J. Joseph, Ibne Karim M. Ali, Antoine Talarmin, Isabel Marcelino

    Published in Frontiers in Microbiology (2023-02-01)
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  11. 11

    TAL Effector Repertoires of Strains of <i>Xanthomonas phaseoli</i> pv. <i>manihotis</i> in Commercial Cassava Crops Reveal High Diversity at the Country Scale by Carlos A. Zárate-Chaves, Daniela Osorio-Rodríguez, Rubén E. Mora, Álvaro L. Pérez-Quintero, Alexis Dereeper, Silvia Restrepo, Camilo E. López, Boris Szurek, Adriana Bernal

    Published in Microorganisms (2021-02-01)
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  12. 12

    Emergence of a Novel Lineage and Wide Spread of a <i>bla</i><sub>CTX-M-15</sub>/IncHI2/ST1 Plasmid among Nosocomial <i>Enterobacter</i> in Guadeloupe by Matthieu Pot, Yann Reynaud, David Couvin, Alexis Dereeper, Séverine Ferdinand, Sylvaine Bastian, Tania Foucan, Jean-David Pommier, Marc Valette, Antoine Talarmin, Stéphanie Guyomard-Rabenirina, Sébastien Breurec

    Published in Antibiotics (2022-10-01)
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