Search Results - Casey R.J. Hubert

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  1. 1

    Environmental Selection and Biogeography Shape the Microbiome of Subsurface Petroleum Reservoirs by Daniel A. Gittins, Srijak Bhatnagar, Casey R. J. Hubert

    Published in mSystems (2023-04-01)
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  2. 2

    “Freezing” Thermophiles: From One Temperature Extreme to Another by Tetyana Milojevic, Margaret Anne Cramm, Casey R. J. Hubert, Frances Westall

    Published in Microorganisms (2022-12-01)
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  3. 3

    Metagenomic Investigation of a Low Diversity, High Salinity Offshore Oil Reservoir by Gabrielle Scheffer, Casey R. J. Hubert, Dennis R. Enning, Sven Lahme, Jaspreet Mand, Júlia R. de Rezende

    Published in Microorganisms (2021-10-01)
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  4. 4

    Polymer biodegradation by Halanaerobium promotes reservoir souring during hydraulic fracturing by Gabrielle Scheffer, Anirban Chakraborty, Kaela K. Amundson, Rohan Khan, Michael J. Wilkins, Paul Evans, Casey R. J. Hubert

    Published in Applied and Environmental Microbiology (2025-05-01)
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  5. 5

    SituSeq: an offline protocol for rapid and remote Nanopore 16S rRNA amplicon sequence analysis by Jackie Zorz, Carmen Li, Anirban Chakraborty, Daniel A. Gittins, Taylor Surcon, Natasha Morrison, Robbie Bennett, Adam MacDonald, Casey R. J. Hubert

    Published in ISME Communications (2023-04-01)
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  6. 6

    Phylogenetically and catabolically diverse diazotrophs reside in deep-sea cold seep sediments by Xiyang Dong, Chuwen Zhang, Yongyi Peng, Hong-Xi Zhang, Ling-Dong Shi, Guangshan Wei, Casey R. J. Hubert, Yong Wang, Chris Greening

    Published in Nature Communications (2022-08-01)
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  7. 7

    Evolutionary ecology of microbial populations inhabiting deep sea sediments associated with cold seeps by Xiyang Dong, Yongyi Peng, Muhua Wang, Laura Woods, Wenxue Wu, Yong Wang, Xi Xiao, Jiwei Li, Kuntong Jia, Chris Greening, Zongze Shao, Casey R. J. Hubert

    Published in Nature Communications (2023-02-01)
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  8. 8

    Predicting hydrocarbon presence in marine cold seep sediments using machine learning models trained with benthic bacterial 16S rRNA taxonomy by Rohan Khan, Tulika Bhardwaj, Carmen Li, Anirban Chakraborty, José M. Seoane, James M. Brooks, Bernie B. Bernard, Adam MacDonald, Natasha MacAdam, Calvin Campbell, Martin Fowler, Casey R. J. Hubert

    Published in Microbiology Spectrum (2025-10-01)
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  9. 9

    Metagenomic analysis after selective culture enrichment of hospital and community wastewater enhances antimicrobial resistance gene detection by Nicole Acosta, Jangwoo Lee, Maria A. Bautista, Srijak Bhatnagar, Carmen Li, Barbara J. Waddell, Emily Au, Puja Pradhan, Rhonda G. Clark, Jon Meddings, Gopal Achari, Johann D. Pitout, John Conly, Kevin Frankowski, Casey R. J. Hubert, Michael D. Parkins

    Published in mBio (2025-09-01)
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  10. 10

    Longitudinal monitoring of sewershed resistomes in socioeconomically diverse urban neighborhoods by Jangwoo Lee, Kevin Xiang, Emily Au, Shahrzad Sarabi, Nicole Acosta, Srijak Bhatnagar, Jennifer Van Doorn, Stefania Bertazzon, John M. Conly, Elissa Rennert-May, Johann D. D. Pitout, Bonita E. Lee, Xiaoli Pang, Christine O’Grady, Kevin Frankowski, Casey R. J. Hubert, Michael D. Parkins

    Published in Communications Medicine (2025-01-01)
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  11. 11

    Wastewater surveillance monitoring of SARS-CoV-2 variants of concern and dynamics of transmission and community burden of COVID-19 by Maria E. Hasing, Bonita E. Lee, Tiejun Gao, Qiaozhi Li, Yuanyuan Qiu, Erik Ellehoj, Tyson E. Graber, Meghan Fuzzen, Mark Servos, Chrystal Landgraff, Robert Delatolla, Graham Tipples, Nathan Zelyas, Deena Hinshaw, Rasha Maal-Bared, Christopher Sikora, Michael Parkins, Casey R. J. Hubert, Kevin Frankowski, Steve E. Hrudey, Xiaoli L. Pang

    Published in Emerging Microbes and Infections (2023-12-01)
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  12. 12

    Realizing the value in “non-standard” parts of the qPCR standard curve by integrating fundamentals of quantitative microbiology by Philip J. Schmidt, Nicole Acosta, Alex H. S. Chik, Patrick M. D’Aoust, Robert Delatolla, Hadi A. Dhiyebi, Melissa B. Glier, Casey R. J. Hubert, Jennifer Kopetzky, Chand S. Mangat, Xiao-Li Pang, Xiao-Li Pang, Xiao-Li Pang, Shelley W. Peterson, Natalie Prystajecky, Natalie Prystajecky, Yuanyuan Qiu, Mark R. Servos, Monica B. Emelko

    Published in Frontiers in Microbiology (2023-03-01)
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  13. 13

    Performance and suitability of wastewater based-surveillance for SARS-CoV-2 RNA in public schools by Nicole Acosta, Alex Buchner Beaudet, Paul Westlund, Kevin Frankowski, Jia Hu, Navid Sedaghat, Puja Pradhan, Lawrence Man, Jordan Hollman, María A. Bautista, Barbara J. Waddell, Janine McCalder, Matthew Penney, Jianwei Chen, Jon Meddings, Gopal Achari, M. Cathryn Ryan, Jason L. Cabaj, Rhonda G. Clark, Casey R. J. Hubert, Michael D. Parkins

    Published in Scientific Reports (2025-10-01)
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  14. 14

    Tracking Emergence and Spread of SARS-CoV-2 Omicron Variant in Large and Small Communities by Wastewater Monitoring in Alberta, Canada by Casey R.J. Hubert, Nicole Acosta, Barbara J.M. Waddell, Maria E. Hasing, Yuanyuan Qiu, Meghan Fuzzen, Nathanael B.J. Harper, María A. Bautista, Tiejun Gao, Chloe Papparis, Jenn Van Doorn, Kristine Du, Kevin Xiang, Leslie Chan, Laura Vivas, Puja Pradhan, Janine McCalder, Kashtin Low, Whitney E. England, Darina Kuzma, John Conly, M. Cathryn Ryan, Gopal Achari, Jia Hu, Jason L. Cabaj, Chris Sikora, Larry Svenson, Nathan Zelyas, Mark Servos, Jon Meddings, Steve E. Hrudey, Kevin Frankowski, Michael D. Parkins, Xiaoli (Lilly) Pang, Bonita E. Lee

    Published in Emerging Infectious Diseases (2022-09-01)
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  15. 15

    Consistent trends from different methods for monitoring SARS-CoV-2 in urban wastewater during a 29-month longitudinal study by Janine McCalder, Janine McCalder, Jangwoo Lee, Jangwoo Lee, Judy Qiu, Qiaozhi Li, Linnet Immaraj, Nicole Acosta, María A. Bautista, Melissa Wilson, Barbara Waddell, Kristine Du, Aito Ueno, Rhonda Clark, Rhonda Clark, Alexander Krusina, Danielle A. Southern, Tyler Williamson, Tyler Williamson, Chloe Papparis, Paul Montesclaros, Lance Non, September Stefani, Gail Visser, Puja Pradhan, Norma Ruecker, John Conly, John Conly, John Conly, John Conly, John Conly, John Conly, Steve Hrudey, Kevin Frankowski, Bonita Lee, Bonita Lee, Michael D. Parkins, Michael D. Parkins, Michael D. Parkins, Xiaoli Pang, Xiaoli Pang, Casey R. J. Hubert

    Published in Frontiers in Microbiology (2025-06-01)
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