Search Results - Christian Beisel

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  1. 1

    High-Resolution Profiling of Drosophila Replication Start Sites Reveals a DNA Shape and Chromatin Signature of Metazoan Origins by Federico Comoglio, Tommy Schlumpf, Virginia Schmid, Remo Rohs, Christian Beisel, Renato Paro

    Published in Cell Reports (2015-05-01)
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  2. 2

    Tracking and characterization of partial and full epithelial-mesenchymal transition cells in a mouse model of metastatic breast cancer by Fabiana Lüönd, Natascha Santacroce, Christian Beisel, Laurent Guérard, Thomas R. Bürglin, Gerhard Christofori, Nami Sugiyama

    Published in STAR Protocols (2022-06-01)
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  3. 3

    High-resolution analysis of parent-of-origin allelic expression in the Arabidopsis Endosperm. by Philip Wolff, Isabelle Weinhofer, Jonathan Seguin, Pawel Roszak, Christian Beisel, Mark T A Donoghue, Charles Spillane, Magnus Nordborg, Marc Rehmsmeier, Claudia Köhler

    Published in PLoS Genetics (2011-06-01)
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  4. 4

    Treemmer: a tool to reduce large phylogenetic datasets with minimal loss of diversity by Fabrizio Menardo, Chloé Loiseau, Daniela Brites, Mireia Coscolla, Sebastian M. Gygli, Liliana K. Rutaihwa, Andrej Trauner, Christian Beisel, Sonia Borrell, Sebastien Gagneux

    Published in BMC Bioinformatics (2018-05-01)
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  5. 5

    Detection of isoforms and genomic alterations by high-throughput full-length single-cell RNA sequencing in ovarian cancer by Arthur Dondi, Ulrike Lischetti, Francis Jacob, Franziska Singer, Nico Borgsmüller, Ricardo Coelho, Tumor Profiler Consortium, Viola Heinzelmann-Schwarz, Christian Beisel, Niko Beerenwinkel

    Published in Nature Communications (2023-11-01)
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  6. 6

    Single‐cell mRNA profiling reveals the hierarchical response of miRNA targets to miRNA induction by Andrzej J Rzepiela, Souvik Ghosh, Jeremie Breda, Arnau Vina‐Vilaseca, Afzal P Syed, Andreas J Gruber, Katja Eschbach, Christian Beisel, Erik van Nimwegen, Mihaela Zavolan

    Published in Molecular Systems Biology (2018-08-01)
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  7. 7

    Dynamic thresholding and tissue dissociation optimization for CITE-seq identifies differential surface protein abundance in metastatic melanoma by Ulrike Lischetti, Aizhan Tastanova, Franziska Singer, Linda Grob, Matteo Carrara, Phil F. Cheng, Julia M. Martínez Gómez, Federica Sella, Veronika Haunerdinger, Christian Beisel, Mitchell P. Levesque

    Published in Communications Biology (2023-08-01)
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  8. 8

    Detection and Genome Sequencing of SARS-CoV-2 in a Domestic Cat with Respiratory Signs in Switzerland by Julia Klaus, Marina L. Meli, Barbara Willi, Sarah Nadeau, Christian Beisel, Tanja Stadler, ETH SARS-CoV-2 Sequencing Team, Herman Egberink, Shan Zhao, Hans Lutz, Barbara Riond, Nina Rösinger, Hanspeter Stalder, Sandra Renzullo, Regina Hofmann-Lehmann

    Published in Viruses (2021-03-01)
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  9. 9

    A New Phylogenetic Framework for the Animal-Adapted Mycobacterium tuberculosis Complex by Daniela Brites, Daniela Brites, Chloé Loiseau, Chloé Loiseau, Fabrizio Menardo, Fabrizio Menardo, Sonia Borrell, Sonia Borrell, Maria Beatrice Boniotti, Robin Warren, Anzaan Dippenaar, Sven David Charles Parsons, Christian Beisel, Marcel A. Behr, Janet A. Fyfe, Mireia Coscolla, Sebastien Gagneux, Sebastien Gagneux

    Published in Frontiers in Microbiology (2018-11-01)
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  10. 10

    The relative transmission fitness of multidrug-resistant Mycobacterium tuberculosis in a drug resistance hotspot by Chloé Loiseau, Etthel M. Windels, Sebastian M. Gygli, Levan Jugheli, Nino Maghradze, Daniela Brites, Amanda Ross, Galo Goig, Miriam Reinhard, Sonia Borrell, Andrej Trauner, Anna Dötsch, Rusudan Aspindzelashvili, Rebecca Denes, Klaus Reither, Christian Beisel, Nestani Tukvadze, Zaza Avaliani, Tanja Stadler, Sebastien Gagneux

    Published in Nature Communications (2023-04-01)
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  11. 11

    Detection of SARS-CoV-2 RNA in a Zoo-Kept Red Fox (<i>Vulpes vulpes</i>) by Tatjana Chan, Julia Ginders, Evelyn Kuhlmeier, Marina L. Meli, Eva Bönzli, Theres Meili, Julia Hüttl, Jean-Michel Hatt, Karin Hindenlang Clerc, Anja Kipar, Fabia Wyss, Christian Wenker, Marie-Pierre Ryser-Degiorgis, Cecilia Valenzuela Agüí, Christian Urban, Christian Beisel, Tanja Stadler, Regina Hofmann-Lehmann

    Published in Viruses (2024-03-01)
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  12. 12

    Detection and Molecular Characterization of the SARS-CoV-2 Delta Variant and the Specific Immune Response in Companion Animals in Switzerland by Evelyn Kuhlmeier, Tatjana Chan, Cecilia Valenzuela Agüí, Barbara Willi, Aline Wolfensberger, Christian Beisel, Ivan Topolsky, Niko Beerenwinkel, Tanja Stadler, Swiss SARS-CoV-2 Sequencing Consortium, Sarah Jones, Grace Tyson, Margaret J. Hosie, Katja Reitt, Julia Hüttl, Marina L. Meli, Regina Hofmann-Lehmann

    Published in Viruses (2023-01-01)
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  13. 13

    Genome-to-genome analysis reveals associations between human and mycobacterial genetic variation in tuberculosis patients from Tanzania by Zhi Ming Xu, Michaela Zwyer, Hellen Hiza, Sarah Schmidiger, Mohamed Sasamalo, Miriam Reinhard, Anna Doetsch, Sonia Borrell, Olivier Naret, Sina Rüeger, Dylan Lawless, Simon Tang, Faima Isihaka, Hosiana Temba, Thomas Maroa, Rastard Naftari, Christian Beisel, Jerry Hella, Klaus Reither, Daniela Brites, Damien Portevin, Sebastien Gagneux, Jacques Fellay

    Published in BMC Medical Genomics (2025-06-01)
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  14. 14

    Local adaptation in populations of Mycobacterium tuberculosis endemic to the Indian Ocean Rim [version 1; peer review: 2 approved] by Fabrizio Menardo, Liliana K. Rutaihwa, Michaela Zwyer, Sonia Borrell, Iñaki Comas, Emilyn Costa Conceição, Mireia Coscolla, Helen Cox, Moses Joloba, Horng-Yunn Dou, Julia Feldmann, Lukas Fenner, Janet Fyfe, Qian Gao, Darío García de Viedma, Alberto L. Garcia-Basteiro, Sebastian M. Gygli, Jerry Hella, Hellen Hiza, Levan Jugheli, Lujeko Kamwela, Midori Kato-Maeda, Qingyun Liu, Serej D. Ley, Chloe Loiseau, Surakameth Mahasirimongkol, Bijaya Malla, Prasit Palittapongarnpim, Niaina Rakotosamimanana, Voahangy Rasolofo, Miriam Reinhard, Klaus Reither, Mohamed Sasamalo, Rafael Silva Duarte, Christophe Sola, Philip Suffys, Karla Valeria Batista Lima, Dorothy Yeboah-Manu, Christian Beisel, Daniela Brites, Sebastien Gagneux

    Published in F1000Research (2021-02-01)
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  15. 15

    Single-cell landscape of innate and acquired drug resistance in acute myeloid leukemia by Rebekka Wegmann, Ximena Bonilla, Ruben Casanova, Stéphane Chevrier, Ricardo Coelho, Cinzia Esposito, Joanna Ficek-Pascual, Sandra Goetze, Gabriele Gut, Francis Jacob, Andrea Jacobs, Jack Kuipers, Ulrike Lischetti, Julien Mena, Emanuela S. Milani, Michael Prummer, Jacobo Sarabia Del Castillo, Franziska Singer, Sujana Sivapatham, Nora C. Toussaint, Oliver Vilinovszki, Mattheus H. E. Wildschut, Tharshika Thavayogarajah, Disha Malani, The TumorProfiler Consortium, Rudolf Aebersold, Marina Bacac, Niko Beerenwinkel, Christian Beisel, Bernd Bodenmiller, Viola Heinzelmann-Schwarz, Viktor H. Koelzer, Mitchell P. Levesque, Holger Moch, Lucas Pelkmans, Gunnar Rätsch, Markus Tolnay, Andreas Wicki, Bernd Wollscheid, Markus G. Manz, Berend Snijder, Alexandre P. A. Theocharides

    Published in Nature Communications (2024-10-01)
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  16. 16

    Quantification of the spread of SARS-CoV-2 variant B.1.1.7 in Switzerland by Chaoran Chen, Sarah Ann Nadeau, Ivan Topolsky, Marc Manceau, Jana S. Huisman, Kim Philipp Jablonski, Lara Fuhrmann, David Dreifuss, Katharina Jahn, Christiane Beckmann, Maurice Redondo, Christoph Noppen, Lorenz Risch, Martin Risch, Nadia Wohlwend, Sinem Kas, Thomas Bodmer, Tim Roloff, Madlen Stange, Adrian Egli, Isabella Eckerle, Laurent Kaiser, Rebecca Denes, Mirjam Feldkamp, Ina Nissen, Natascha Santacroce, Elodie Burcklen, Catharine Aquino, Andreia Cabral de Gouvea, Maria Domenica Moccia, Simon Grüter, Timothy Sykes, Lennart Opitz, Griffin White, Laura Neff, Doris Popovic, Andrea Patrignani, Jay Tracy, Ralph Schlapbach, Emmanouil T. Dermitzakis, Keith Harshman, Ioannis Xenarios, Henri Pegeot, Lorenzo Cerutti, Deborah Penet, Anthony Blin, Melyssa Elies, Christian L. Althaus, Christian Beisel, Niko Beerenwinkel, Martin Ackermann, Tanja Stadler

    Published in Epidemics (2021-12-01)
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