Search Results - Daniel Croll

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  1. 1

    Dimensions of genome dynamics in fungal pathogens: from fundamentals to applications by Daniel Croll

    Published in BMC Biology (2024-01-01)
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  2. 2

    A pangenome-guided manually curated library of transposable elements for Zymoseptoria tritici by Tobias Baril, Daniel Croll

    Published in BMC Research Notes (2023-11-01)
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  3. 3

    Recent transposable element bursts are associated with the proximity to genes in a fungal plant pathogen. by Ursula Oggenfuss, Daniel Croll

    Published in PLoS Pathogens (2023-02-01)
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  4. 4

    Phylogenomic signatures of repeat-induced point mutations across the fungal kingdom. by Thomas Badet, Daniel Croll

    Published in PLoS Biology (2025-10-01)
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  5. 5

    Genome-wide expression QTL mapping reveals the highly dynamic regulatory landscape of a major wheat pathogen by Leen Nanchira Abraham, Daniel Croll

    Published in BMC Biology (2023-11-01)
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  6. 6

    A systematic screen for co-option of transposable elements across the fungal kingdom by Ursula Oggenfuss, Thomas Badet, Daniel Croll

    Published in Mobile DNA (2024-01-01)
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  7. 7

    Pangenome analyses of the wheat pathogen Zymoseptoria tritici reveal the structural basis of a highly plastic eukaryotic genome by Clémence Plissonneau, Fanny E. Hartmann, Daniel Croll

    Published in BMC Biology (2018-01-01)
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  8. 8

    Population-level transposable element expression dynamics influence trait evolution in a fungal crop pathogen by Leen Nanchira Abraham, Ursula Oggenfuss, Daniel Croll

    Published in mBio (2024-03-01)
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  9. 9

    Combined reference-free and multi-reference based GWAS uncover cryptic variation underlying rapid adaptation in a fungal plant pathogen. by Anik Dutta, Bruce A McDonald, Daniel Croll

    Published in PLoS Pathogens (2023-11-01)
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  10. 10

    Breakage-fusion-bridge cycles and large insertions contribute to the rapid evolution of accessory chromosomes in a fungal pathogen. by Daniel Croll, Marcello Zala, Bruce A McDonald

    Published in PLoS Genetics (2013-06-01)
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  11. 11

    Rapid sequence evolution driven by transposable elements at a virulence locus in a fungal wheat pathogen by Nikhil Kumar Singh, Thomas Badet, Leen Abraham, Daniel Croll

    Published in BMC Genomics (2021-05-01)
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  12. 12

    Copy number variation introduced by a massive mobile element facilitates global thermal adaptation in a fungal wheat pathogen by Sabina Moser Tralamazza, Emile Gluck-Thaler, Alice Feurtey, Daniel Croll

    Published in Nature Communications (2024-07-01)
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  13. 13

    Quantifying Trade-Offs in the Choice of Ribosomal Barcoding Markers for Fungal Amplicon Sequencing: a Case Study on the Grapevine Trunk Mycobiome by Vinciane Monod, Valérie Hofstetter, Vivian Zufferey, Olivier Viret, Katia Gindro, Daniel Croll

    Published in Microbiology Spectrum (2022-12-01)
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  14. 14

    Landscape-scale endophytic community analyses in replicated grapevine stands reveal that dieback disease is unlikely to be caused by specific fungal communities by Vinciane Monod, Valérie Hofstetter, Olivier Viret, Vivian Zufferey, Katia Gindro, Daniel Croll

    Published in Applied and Environmental Microbiology (2025-07-01)
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  15. 15

    Identifying the pedoclimatic conditions most critical in the susceptibility of a grapevine cultivar to esca disease by Valérie Hofstetter, Vinciane Monod, Matthieu Wilhelm, Olivier Viret, Katia Gindro, Daniel Croll, Vivian Zufferey

    Published in OENO One (2025-01-01)
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  16. 16

    Diversification, loss, and virulence gains of the major effector AvrStb6 during continental spread of the wheat pathogen Zymoseptoria tritici. by Ana Margarida Sampaio, Sabina Moser Tralamazza, Faharidine Mohamadi, Yannick De Oliveira, Jérôme Enjalbert, Cyrille Saintenac, Daniel Croll

    Published in PLoS Pathogens (2025-03-01)
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  17. 17

    Genome of Malassezia arunalokei and Its Distribution on Facial Skin by Yong-Joon Cho, Taeyune Kim, Daniel Croll, Minji Park, Donghyeun Kim, Hye Lim Keum, Woo Jun Sul, Won Hee Jung

    Published in Microbiology Spectrum (2022-06-01)
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  18. 18

    Variability in an effector gene promoter of a necrotrophic fungal pathogen dictates epistasis and effector-triggered susceptibility in wheat. by Evan John, Silke Jacques, Huyen T T Phan, Lifang Liu, Danilo Pereira, Daniel Croll, Karam B Singh, Richard P Oliver, Kar-Chun Tan

    Published in PLoS Pathogens (2022-01-01)
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  19. 19

    Genome compartmentalization predates species divergence in the plant pathogen genus Zymoseptoria by Alice Feurtey, Cécile Lorrain, Daniel Croll, Christoph Eschenbrenner, Michael Freitag, Michael Habig, Janine Haueisen, Mareike Möller, Klaas Schotanus, Eva H. Stukenbrock

    Published in BMC Genomics (2020-08-01)
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  20. 20

    A new molecular seed assay to predict Ustilago nuda field infection levels by Cecilia Panzetti, Eveline Jenny, Irene Bänziger, Andreas Kägi, Susanne Vogelgsang, Thomas Hebeisen, Peter Büttner, Daniel Croll, Franco Widmer, Karen E. Sullam

    Published in Scientific Reports (2025-10-01)
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