Search Results - Daniel Janies

Daniel Janies

Daniel Andrew Janies is an American scientist who has made significant contributions in the field of evolutionary biology and on the development of tools for the study of evolution and the spread of pathogens. He is involved with research for the United States Department of Defense and has advised multiple instances of the government on methods for disease surveillance. Provided by Wikipedia
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  1. 1

    Ensemble machine learning modeling for the prediction of artemisinin resistance in malaria [version 5; peer review: 1 approved, 2 approved with reservations] by Daniel Janies, Colby T. Ford

    Published in F1000Research (2020-06-01)
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  2. 2

    Leveraging advances in data-driven deep learning methods for hybrid epidemic modeling by Shi Chen, Daniel Janies, Rajib Paul, Jean-Claude Thill

    Published in Epidemics (2024-09-01)
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  3. 3

    Echinoderm radial glia in adult cell renewal, indeterminate growth, and regeneration by Vladimir Mashanov, Soji Ademiluyi, Denis Jacob Machado, Robert Reid, Daniel Janies

    Published in Frontiers in Neural Circuits (2023-09-01)
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  4. 4

    Sequence-based identification of Anopheles species in eastern Ethiopia by Tamar E. Carter, Solomon Yared, Shantoy Hansel, Karen Lopez, Daniel Janies

    Published in Malaria Journal (2019-04-01)
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  5. 5

    Venomix: a simple bioinformatic pipeline for identifying and characterizing toxin gene candidates from transcriptomic data by Jason Macrander, Jyothirmayi Panda, Daniel Janies, Marymegan Daly, Adam M. Reitzel

    Published in PeerJ (2018-07-01)
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  6. 6

    Predicting antibody and ACE2 affinity for SARS-CoV-2 BA.2.86 and JN.1 with in silico protein modeling and docking by Shirish Yasa, Shirish Yasa, Shirish Yasa, Sayal Guirales-Medrano, Sayal Guirales-Medrano, Denis Jacob Machado, Denis Jacob Machado, Colby T. Ford, Colby T. Ford, Colby T. Ford, Colby T. Ford, Daniel Janies, Daniel Janies

    Published in Frontiers in Virology (2024-07-01)
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  7. 7

    Insecticide resistance in Anopheles stephensi in Somali Region, eastern Ethiopia by Solomon Yared, Araya Gebressielasie, Lambodhar Damodaran, Victoria Bonnell, Karen Lopez, Daniel Janies, Tamar E. Carter

    Published in Malaria Journal (2020-05-01)
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  8. 8

    Unveiling putative modulators of mutable collagenous tissue in the brittle star Ophiomastix wendtii: an RNA-Seq analysis by Reyhaneh Nouri, Vladimir Mashanov, April Harris, Gari New, William Taylor, Daniel Janies, Robert W. Reid, Denis Jacob Machado

    Published in BMC Genomics (2024-10-01)
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  9. 9

    A draft genome assembly for the dart-poison frog Phyllobates terribilis by Roberto Márquez, Denis Jacob Machado, Reyhaneh Nouri, Kerry L. Gendreau, Daniel Janies, Ralph A. Saporito, Marcus R. Kronforst, Taran Grant

    Published in GigaByte (2025-06-01)
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  10. 10

    Large-scale computational modelling of H5 influenza variants against HA1-neutralising antibodiesResearch in context by Colby T. Ford, Shirish Yasa, Khaled Obeid, Rafael Jaimes, III, Phillip J. Tomezsko, Sayal Guirales-Medrano, Richard Allen White, III, Daniel Janies

    Published in EBioMedicine (2025-04-01)
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  11. 11

    Content and sentiment surveillance (CSI): A critical component for modeling modern epidemics by Shi Chen, Shi Chen, Shi Chen, Shuhua Jessica Yin, Yuqi Guo, Yuqi Guo, Yaorong Ge, Daniel Janies, Michael Dulin, Michael Dulin, Cheryl Brown, Cheryl Brown, Patrick Robinson, Patrick Robinson, Dongsong Zhang, Dongsong Zhang

    Published in Frontiers in Public Health (2023-03-01)
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  12. 12

    Zika Virus: Medical Countermeasure Development Challenges. by Robert W Malone, Jane Homan, Michael V Callahan, Jill Glasspool-Malone, Lambodhar Damodaran, Adriano De Bernardi Schneider, Rebecca Zimler, James Talton, Ronald R Cobb, Ivan Ruzic, Julie Smith-Gagen, Daniel Janies, James Wilson, Zika Response Working Group

    Published in PLoS Neglected Tropical Diseases (2016-03-01)
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  13. 13

    Phylogeny, ancestral ranges and reclassification of sand dollars by Hsin Lee, Kwen-Shen Lee, Chia-Hsin Hsu, Chen-Wei Lee, Ching-En Li, Jia-Kang Wang, Chien‑Chia Tseng, Wei-Jen Chen, Ching-Chang Horng, Colby T. Ford, Andreas Kroh, Omri Bronstein, Hayate Tanaka, Tatsuo Oji, Jih-Pai Lin, Daniel Janies

    Published in Scientific Reports (2023-06-01)
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  14. 14

    Genetic diversity of Anopheles stephensi in Ethiopia provides insight into patterns of spread by Tamar E. Carter, Solomon Yared, Dejene Getachew, Joseph Spear, Sae Hee Choi, Jeanne N. Samake, Peter Mumba, Dereje Dengela, Gedeon Yohannes, Sheleme Chibsa, Matthew Murphy, Gunawardena Dissanayake, Cecilia Flately, Karen Lopez, Daniel Janies, Sarah Zohdy, Seth R. Irish, Meshesha Balkew

    Published in Parasites & Vectors (2021-12-01)
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  15. 15

    Reply to: Embracing the taxonomic and topological stability of phylogenomics by Hsin Lee, Kwen‑Shen Lee, Chia‑Hsin Hsu, Chen‑Wei Lee, Ching‑En Li, Jia‑Kang Wang, Chien‑Chia Tseng, Wei‑Jen Chen, Ching‑Chang Horng, Colby T. Ford, Andreas Kroh, Omri Bronstein, Hayate Tanaka, Tatsuo Oji, Jih‑Pai Lin, Daniel Janies

    Published in Scientific Reports (2024-02-01)
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  16. 16

    Eco-virological approach for assessing the role of wild birds in the spread of avian influenza H5N1 along the Central Asian Flyway. by Scott H Newman, Nichola J Hill, Kyle A Spragens, Daniel Janies, Igor O Voronkin, Diann J Prosser, Baoping Yan, Fumin Lei, Nyambayar Batbayar, Tseveenmyadag Natsagdorj, Charles M Bishop, Patrick J Butler, Martin Wikelski, Sivananinthaperumal Balachandran, Taej Mundkur, David C Douglas, John Y Takekawa

    Published in PLoS ONE (2012-01-01)
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  17. 17

    Projected resurgence of COVID-19 in the United States in July—December 2021 resulting from the increased transmissibility of the Delta variant and faltering vaccination by Shaun Truelove, Claire P Smith, Michelle Qin, Luke C Mullany, Rebecca K Borchering, Justin Lessler, Katriona Shea, Emily Howerton, Lucie Contamin, John Levander, Jessica Kerr, Harry Hochheiser, Matt Kinsey, Kate Tallaksen, Shelby Wilson, Lauren Shin, Kaitlin Rainwater-Lovett, Joseph C Lemairtre, Juan Dent, Joshua Kaminsky, Elizabeth C Lee, Javier Perez-Saez, Alison Hill, Dean Karlen, Matteo Chinazzi, Jessica T Davis, Kunpeng Mu, Xinyue Xiong, Ana Pastore y Piontti, Alessandro Vespignani, Ajitesh Srivastava, Przemyslaw Porebski, Srinivasan Venkatramanan, Aniruddha Adiga, Bryan Lewis, Brian Klahn, Joseph Outten, Mark Orr, Galen Harrison, Benjamin Hurt, Jiangzhuo Chen, Anil Vullikanti, Madhav Marathe, Stefan Hoops, Parantapa Bhattacharya, Dustin Machi, Shi Chen, Rajib Paul, Daniel Janies, Jean-Claude Thill, Marta Galanti, Teresa K Yamana, Sen Pei, Jeffrey L Shaman, Jessica M Healy, Rachel B Slayton, Matthew Biggerstaff, Michael A Johansson, Michael C Runge, Cecile Viboud

    Published in eLife (2022-06-01)
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  18. 18

    Potential impact of annual vaccination with reformulated COVID-19 vaccines: Lessons from the US COVID-19 scenario modeling hub. by Sung-Mok Jung, Sara L Loo, Emily Howerton, Lucie Contamin, Claire P Smith, Erica C Carcelén, Katie Yan, Samantha J Bents, John Levander, Jessi Espino, Joseph C Lemaitre, Koji Sato, Clifton D McKee, Alison L Hill, Matteo Chinazzi, Jessica T Davis, Kunpeng Mu, Alessandro Vespignani, Erik T Rosenstrom, Sebastian A Rodriguez-Cartes, Julie S Ivy, Maria E Mayorga, Julie L Swann, Guido España, Sean Cavany, Sean M Moore, T Alex Perkins, Shi Chen, Rajib Paul, Daniel Janies, Jean-Claude Thill, Ajitesh Srivastava, Majd Al Aawar, Kaiming Bi, Shraddha Ramdas Bandekar, Anass Bouchnita, Spencer J Fox, Lauren Ancel Meyers, Przemyslaw Porebski, Srini Venkatramanan, Aniruddha Adiga, Benjamin Hurt, Brian Klahn, Joseph Outten, Jiangzhuo Chen, Henning Mortveit, Amanda Wilson, Stefan Hoops, Parantapa Bhattacharya, Dustin Machi, Anil Vullikanti, Bryan Lewis, Madhav Marathe, Harry Hochheiser, Michael C Runge, Katriona Shea, Shaun Truelove, Cécile Viboud, Justin Lessler

    Published in PLoS Medicine (2024-04-01)
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  19. 19

    Evaluation of the US COVID-19 Scenario Modeling Hub for informing pandemic response under uncertainty by Emily Howerton, Lucie Contamin, Luke C. Mullany, Michelle Qin, Nicholas G. Reich, Samantha Bents, Rebecca K. Borchering, Sung-mok Jung, Sara L. Loo, Claire P. Smith, John Levander, Jessica Kerr, J. Espino, Willem G. van Panhuis, Harry Hochheiser, Marta Galanti, Teresa Yamana, Sen Pei, Jeffrey Shaman, Kaitlin Rainwater-Lovett, Matt Kinsey, Kate Tallaksen, Shelby Wilson, Lauren Shin, Joseph C. Lemaitre, Joshua Kaminsky, Juan Dent Hulse, Elizabeth C. Lee, Clifton D. McKee, Alison Hill, Dean Karlen, Matteo Chinazzi, Jessica T. Davis, Kunpeng Mu, Xinyue Xiong, Ana Pastore y Piontti, Alessandro Vespignani, Erik T. Rosenstrom, Julie S. Ivy, Maria E. Mayorga, Julie L. Swann, Guido España, Sean Cavany, Sean Moore, Alex Perkins, Thomas Hladish, Alexander Pillai, Kok Ben Toh, Ira Longini, Shi Chen, Rajib Paul, Daniel Janies, Jean-Claude Thill, Anass Bouchnita, Kaiming Bi, Michael Lachmann, Spencer J. Fox, Lauren Ancel Meyers, Ajitesh Srivastava, Przemyslaw Porebski, Srini Venkatramanan, Aniruddha Adiga, Bryan Lewis, Brian Klahn, Joseph Outten, Benjamin Hurt, Jiangzhuo Chen, Henning Mortveit, Amanda Wilson, Madhav Marathe, Stefan Hoops, Parantapa Bhattacharya, Dustin Machi, Betsy L. Cadwell, Jessica M. Healy, Rachel B. Slayton, Michael A. Johansson, Matthew Biggerstaff, Shaun Truelove, Michael C. Runge, Katriona Shea, Cécile Viboud, Justin Lessler

    Published in Nature Communications (2023-11-01)
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