Search Results - Fotis Psomopoulos

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  1. 1

    Software pipelines for RNA-Seq, ChIP-Seq and germline variant calling analyses in common workflow language (CWL) by Konstantinos A. Kyritsis, Nikolaos Pechlivanis, Nikolaos Pechlivanis, Fotis Psomopoulos

    Published in Frontiers in Bioinformatics (2023-11-01)
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  2. 2

    A mini-review on perturbation modelling across single-cell omic modalities by George I. Gavriilidis, Vasileios Vasileiou, Aspasia Orfanou, Naveed Ishaque, Fotis Psomopoulos

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  3. 3

    Exploring plant diversity through soil DNA in Thai national parks for influencing land reform and agriculture planning by Maslin Osathanunkul, Nipitpong Sawongta, Wittaya Pheera, Nikolaos Pechlivanis, Fotis Psomopoulos, Panagiotis Madesis

    Published in PeerJ (2021-08-01)
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  4. 4

    Microbial co-occurrence network demonstrates spatial and climatic trends for global soil diversity by Nikos Pechlivanis, Georgios Karakatsoulis, Konstantinos Kyritsis, Maria Tsagiopoulou, Stefanos Sgardelis, Ilias Kappas, Fotis Psomopoulos

    Published in Scientific Data (2024-06-01)
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  5. 5

    Comparative metagenomics reveals alterations in the soil bacterial community driven by N-fertilizer and Amino 16® application in lettuce by Apostolos Kalivas, Ioannis Ganopoulos, Fotis Psomopoulos, Ioannis Grigoriadis, Aliki Xanthopoulou, Evangelos Hatzigiannakis, Maslin Osathanunkul, Athanasios Tsaftaris, Panagiotis Madesis

    Published in Genomics Data (2017-12-01)
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  6. 6

    High risk HPV-positive women cervicovaginal microbial profiles in a Greek cohort: a retrospective analysis of the GRECOSELF study by Electra Sofou, Glykeria Gkoliou, Glykeria Gkoliou, Nikolaos Pechlivanis, Nikolaos Pechlivanis, Konstantinos Pasentsis, Kimon Chatzistamatiou, Fotis Psomopoulos, Theodoros Agorastos, Kostas Stamatopoulos, Kostas Stamatopoulos

    Published in Frontiers in Microbiology (2023-11-01)
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  7. 7

    Chronic lymphocytic leukemias with trisomy 12 show a distinct DNA methylation profile linked to altered chromatin activation by Maria Tsagiopoulou, Vicente Chapaprieta, Martí Duran-Ferrer, Theodoros Moysiadis, Fotis Psomopoulos, Panagoula Kollia, Nikos Papakonstantinou, Elias Campo, Kostas Stamatopoulos, Jose I. Martin-Subero

    Published in Haematologica (2020-02-01)
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  8. 8

    Infrequent “chronic lymphocytic leukemia-specific” immunoglobulin stereotypes in aged individuals with or without low-count monoclonal B-cell lymphocytosis by Andreas Agathangelidis, Chrysi Galigalidou, Lydia Scarfò, Theodoros Moysiadis, Alessandra Rovida, Maria Gounari, Fotis Psomopoulos, Pamela Ranghetti, Alex Galanis, Frederic Davi, Kostas Stamatopoulos, Anastasia Chatzidimitriou, Paolo Ghia

    Published in Haematologica (2020-06-01)
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  9. 9

    How does software fit into the FDO landscape? by Carlos Martinez-Ortiz, Carole Goble, Daniel Katz, Tom Honeyman, Paula Martinez, Michelle Barker, Leyla Jael Castro, Neil Chue Hong, Morane Gruenpeter, Jennifer Harrow, Anna-Lena Lamprecht, Fotis Psomopoulos

    Published in Research Ideas and Outcomes (2022-10-01)
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  10. 10

    Introducing the FAIR Principles for research software by Michelle Barker, Neil P. Chue Hong, Daniel S. Katz, Anna-Lena Lamprecht, Carlos Martinez-Ortiz, Fotis Psomopoulos, Jennifer Harrow, Leyla Jael Castro, Morane Gruenpeter, Paula Andrea Martinez, Tom Honeyman

    Published in Scientific Data (2022-10-01)
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  11. 11

    P605: IMMUNOGENETICS AND ANTIGEN REACTIVITY PROFILING CONTRIBUTE TO UNRAVELLING THE ONTOGENY OF CLL STEREOTYPED SUBSET #4 by Anastasia Iatrou, Electra Sofou, Eleni Kotroni, Lesley Ann Sutton, Michela Frenquelli, Raphael Sandaltzopoulos, Ioanna Sakellari, Niki Stavrogianni, Fotis Psomopoulos, Paolo Ghia, Richard Rosenquist, Andreas Agathangelidis, Anastasia Chatzidimitriou, Kostas Stamatopoulos

    Published in HemaSphere (2023-08-01)
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  12. 12

    High-throughput analysis of the T cell receptor gene repertoire in low-count monoclonal B cell lymphocytosis reveals a distinct profile from chronic lymphocytic leukemia by Andreas Agathangelidis, Chrysi Galigalidou, Lydia Scarfò, Theodoros Moysiadis, Alessandra Rovida, Elisavet Vlachonikola, Electra Sofou, Fotis Psomopoulos, Anna Vardi, Pamela Ranghetti, Alexandra Siorenta, Alex Galanis, Kostas Stamatopoulos, Anastasia Chatzidimitriou, Paolo Ghia

    Published in Haematologica (2020-01-01)
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  13. 13

    P835: IN SILICO PREDICTION REVEALS PUTATIVE T-CELL CLASS I/II NEOEPITOPES WITHIN THE CLONOTYPIC IMMUNOGLOBULIN HEAVY AND LIGHT CHAINS IN PATIENTS WITH MULTIPLE MYELOMA by Glykeria Gkoliou, Nikos Pechlivanis, Sofia Chatzileontiadou, Charikleia Xydopoulou, Christina Frouzaki, Georgios Karakatsoulis, Elisavet Vlachonikola, Marina Gerousi, Fotis Psomopoulos, Alexandra Siorenta, Maria Papaioannou, Katerina Chlichlia, Kostas Stamatopoulos, Evdoxia Hatjiharissi, Anastasia Chatzidimitriou

    Published in HemaSphere (2023-08-01)
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  14. 14

    Evidence of somatic hypermutation in the antigen binding sites of patients with CLL harboring IGHV genes with 100% germline identity by Electra Sofou, Electra Sofou, Laura Zaragoza-Infante, Nikolaos Pechlivanis, Georgios Karakatsoulis, Sofia Notopoulou, Niki Stavroyianni, Fotis Psomopoulos, Elisavet Georgiou, Anne Langlois de Septenville, Frederic Davi, Andreas Agathangelidis, Anastasia Chatzidimitriou, Anastasia Chatzidimitriou, Kostas Stamatopoulos, Kostas Stamatopoulos

    Published in Frontiers in Oncology (2022-12-01)
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  15. 15

    Darling (v2.0): Mining disease-related databases for the detection of biomedical entity associations by Fotis A. Baltoumas, Evangelos Karatzas, Nefeli K. Venetsianou, Eleni Aplakidou, Konstantinos Giatras, Maria N. Chasapi, Iro N. Chasapi, Ioannis Iliopoulos, Vassiliki A. Iconomidou, Ioannis P. Trougakos, Fotis Psomopoulos, Antonis Giannakakis, Ilias Georgakopoulos-Soares, Panagiota Kontou, Pantelis G. Bagos, Georgios A. Pavlopoulos

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  16. 16

    Antigen selection reflected in the subclonal architecture of the B‐cell receptor immunoglobulin gene repertoire in splenic marginal zone lymphoma by Laura Zaragoza‐Infante, Andreas Agathangelidis, Anastasia Iatrou, Valentin Junet, Nikos Pechlivanis, Maria Karypidou, Triantafyllia Koletsa, Giorgos Karakatsoulis, Alessio Bruscaggin, Zadie Davis, Valeria Spina, Aurelie Verney, Eleftheria Polychronidou, Fotis Psomopoulos, David Oscier, Alexandra Traverse‐Glehen, Maria Papaioannou, Paolo Ghia, Davide Rossi, Anastasia Chatzidimitriou, Kostas Stamatopoulos

    Published in HemaSphere (2025-05-01)
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  17. 17

    The ELIXIR Biodiversity Community: Understanding short- and long-term changes in biodiversity [version 2; peer review: 2 approved, 1 not approved] by Robert M. Waterhouse, Jerry Lanfear, Josephine Burgin, Niels Raes, Matúš Kalaš, Joana Paupério, Patricia M. Palagi, Valeria Di Cola, Physilia Ying Shi Chua, Fotis Psomopoulos, Aristotelis C. Papageorgiou, Toni Gabaldón, Bachir Balech, Lars S. Jermiin, Evangelos Pafilis, Katharina F. Heil, Graham M. Hughes, Endre Barta, Anne-Françoise Adam-Blondon

    Published in F1000Research (2024-05-01)
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  18. 18

    Ten simple rules for making training materials FAIR. by Leyla Garcia, Bérénice Batut, Melissa L Burke, Mateusz Kuzak, Fotis Psomopoulos, Ricardo Arcila, Teresa K Attwood, Niall Beard, Denise Carvalho-Silva, Alexandros C Dimopoulos, Victoria Dominguez Del Angel, Michel Dumontier, Kim T Gurwitz, Roland Krause, Peter McQuilton, Loredana Le Pera, Sarah L Morgan, Päivi Rauste, Allegra Via, Pascal Kahlem, Gabriella Rustici, Celia W G van Gelder, Patricia M Palagi

    Published in PLoS Computational Biology (2020-05-01)
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  19. 19

    Loss of CYLD promotes splenic marginal zone lymphoma by Athanasios Pseftogas, Jessica Bordini, Silvia Heltai, Ferdinando Bonfiglio, Georgios Gavriilidis, Vasileios Vasileiou, Sofoklis Keisaris, Daniela Belloni, Caterina Taccetti, Pamela Ranghetti, Eleonora Perotta, Michela Frenquelli, Uday Aditya Sarkar, Elisa Albi, Francesca Martini, Emmanuela Sant'Antonio, Fabrizio Mavilia, Fotis Psomopoulos, Manasori Daibata, José Ángel Martínez Climent, George Mosialos, Davide Rossi, Alessandro Campanella, Lydia Scarfò, Kostas Stamatopoulos, Konstantinos Xanthopoulos, Paolo Ghia

    Published in HemaSphere (2025-03-01)
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  20. 20

    T cell receptor gene repertoire profiles in subgroups of patients with chronic lymphocytic leukemia bearing distinct genomic aberrations by Elisavet Vlachonikola, Elisavet Vlachonikola, Nikolaos Pechlivanis, Nikolaos Pechlivanis, Georgios Karakatsoulis, Georgios Karakatsoulis, Electra Sofou, Electra Sofou, Glykeria Gkoliou, Glykeria Gkoliou, Sabine Jeromin, Niki Stavroyianni, Pamela Ranghetti, Lydia Scarfo, Cecilia Österholm, Larry Mansouri, Sofia Notopoulou, Alexandra Siorenta, Achilles Anagnostopoulos, Paolo Ghia, Claudia Haferlach, Richard Rosenquist, Richard Rosenquist, Fotis Psomopoulos, Anastasia Kouvatsi, Panagiotis Baliakas, Kostas Stamatopoulos, Kostas Stamatopoulos, Anastasia Chatzidimitriou, Anastasia Chatzidimitriou

    Published in Frontiers in Oncology (2023-02-01)
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