Search Results - Francesco Ciompi
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Deep learning for multiclass tumor cell detection in histopathology slides of hereditary diffuse gastric cancer by Robin Lomans, Valentina Angerilli, Joey Spronck, Liudmila L. Kodach, Irene Gullo, Fátima Carneiro, Rachel S. van der Post, Francesco Ciompi
Published in iScience (2025-08-01)Get full text
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Multi-resolution deep learning characterizes tertiary lymphoid structures and their prognostic relevance in solid tumors by Mart van Rijthoven, Simon Obahor, Fabio Pagliarulo, Maries van den Broek, Peter Schraml, Holger Moch, Jeroen van der Laak, Francesco Ciompi, Karina Silina
Published in Communications Medicine (2024-01-01)Get full text
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Modelling digital health data: The ExaMode ontology for computational pathology by Laura Menotti, Gianmaria Silvello, Manfredo Atzori, Svetla Boytcheva, Francesco Ciompi, Giorgio Maria Di Nunzio, Filippo Fraggetta, Fabio Giachelle, Ornella Irrera, Stefano Marchesin, Niccolò Marini, Henning Müller, Todor Primov
Published in Journal of Pathology Informatics (2023-01-01)Get full text
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PROACTING: predicting pathological complete response to neoadjuvant chemotherapy in breast cancer from routine diagnostic histopathology biopsies with deep learning by Witali Aswolinskiy, Enrico Munari, Hugo M. Horlings, Lennart Mulder, Giuseppe Bogina, Joyce Sanders, Yat-Hee Liu, Alexandra W. van den Belt-Dusebout, Leslie Tessier, Maschenka Balkenhol, Michelle Stegeman, Jeffrey Hoven, Jelle Wesseling, Jeroen van der Laak, Esther H. Lips, Francesco Ciompi
Published in Breast Cancer Research (2023-11-01)Get full text
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Deep learning for fully-automated nuclear pleomorphism scoring in breast cancer by Caner Mercan, Maschenka Balkenhol, Roberto Salgado, Mark Sherman, Philippe Vielh, Willem Vreuls, António Polónia, Hugo M. Horlings, Wilko Weichert, Jodi M. Carter, Peter Bult, Matthias Christgen, Carsten Denkert, Koen van de Vijver, John-Melle Bokhorst, Jeroen van der Laak, Francesco Ciompi
Published in npj Breast Cancer (2022-11-01)Get full text
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Automated mitotic spindle hotspot counts are highly associated with clinical outcomes in systemically untreated early-stage triple-negative breast cancer by Roberto A. Leon-Ferre, Jodi M. Carter, David Zahrieh, Jason P. Sinnwell, Roberto Salgado, Vera J. Suman, David W. Hillman, Judy C. Boughey, Krishna R. Kalari, Fergus J. Couch, James N. Ingle, Maschenka Balkenhol, Francesco Ciompi, Jeroen van der Laak, Matthew P. Goetz
Published in npj Breast Cancer (2024-03-01)Get full text
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7
Comparison of three validated PD-L1 immunohistochemical assays in urothelial carcinoma of the bladder: interchangeability and issues related to patient selection by Enrico Munari, Giulia Querzoli, Matteo Brunelli, Marcella Marconi, Marco Sommaggio, Marco A. Cocchi, Guido Martignoni, Guido Martignoni, George J. Netto, Anna Caliò, Linda Quatrini, Francesca R. Mariotti, Claudio Luchini, Ilaria Girolami, Albino Eccher, Diego Segala, Francesco Ciompi, Giuseppe Zamboni, Giuseppe Zamboni, Lorenzo Moretta, Giuseppe Bogina
Published in Frontiers in Immunology (2022-07-01)Get full text
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8
Unleashing the potential of digital pathology data by training computer-aided diagnosis models without human annotations by Niccolò Marini, Stefano Marchesin, Sebastian Otálora, Marek Wodzinski, Alessandro Caputo, Mart van Rijthoven, Witali Aswolinskiy, John-Melle Bokhorst, Damian Podareanu, Edyta Petters, Svetla Boytcheva, Genziana Buttafuoco, Simona Vatrano, Filippo Fraggetta, Jeroen van der Laak, Maristella Agosti, Francesco Ciompi, Gianmaria Silvello, Henning Muller, Manfredo Atzori
Published in npj Digital Medicine (2022-07-01)Get full text
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9
Tumor budding and poorly differentiated clusters as a biological continuum in colorectal cancer invasion and prognosis by Tariq Sami Haddad, John-Melle Bokhorst, Luuk van den Dobbelsteen, Sonay K. Öztürk, Elias Baumann, Shannon van Vliet, Kiek Verrijp, Nigel B Jamieson, Colin Wood, Martin D. Berger, Richard Kirsch, Marco Aben, Natasja Rutgers, Hideki Ueno, Francesco Ciompi, Femke Simmer, Jeroen van der Laak, Alessandro Lugli, Inti Zlobec, Iris Nagtegaal
Published in Scientific Reports (2025-05-01)Get full text
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Comparing deep learning and pathologist quantification of cell-level PD-L1 expression in non-small cell lung cancer whole-slide images by Leander van Eekelen, Joey Spronck, Monika Looijen-Salamon, Shoko Vos, Enrico Munari, Ilaria Girolami, Albino Eccher, Balazs Acs, Ceren Boyaci, Gabriel Silva de Souza, Muradije Demirel-Andishmand, Luca Dulce Meesters, Daan Zegers, Lieke van der Woude, Willemijn Theelen, Michel van den Heuvel, Katrien Grünberg, Bram van Ginneken, Jeroen van der Laak, Francesco Ciompi
Published in Scientific Reports (2024-03-01)Get full text
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11
Generating dermatopathology reports from gigapixel whole slide images with HistoGPT by Manuel Tran, Paul Schmidle, Ruifeng Ray Guo, Sophia J. Wagner, Valentin Koch, Valerio Lupperger, Brenna Novotny, Dennis H. Murphree, Heather D. Hardway, Marina D’Amato, Judith Lefkes, Daan J. Geijs, Annette Feuchtinger, Alexander Böhner, Robert Kaczmarczyk, Tilo Biedermann, Avital L. Amir, Antien L. Mooyaart, Francesco Ciompi, Geert Litjens, Chen Wang, Nneka I. Comfere, Kilian Eyerich, Stephan A. Braun, Carsten Marr, Tingying Peng
Published in Nature Communications (2025-05-01)Get full text
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The DRAGON benchmark for clinical NLP by Joeran S. Bosma, Koen Dercksen, Luc Builtjes, Romain André, Christian Roest, Stefan J. Fransen, Constant R. Noordman, Mar Navarro-Padilla, Judith Lefkes, Natália Alves, Max J. J. de Grauw, Leander van Eekelen, Joey M. A. Spronck, Megan Schuurmans, Bram de Wilde, Ward Hendrix, Witali Aswolinskiy, Anindo Saha, Jasper J. Twilt, Daan Geijs, Jeroen Veltman, Derya Yakar, Maarten de Rooij, Francesco Ciompi, Alessa Hering, Jeroen Geerdink, Henkjan Huisman, On behalf of the DRAGON consortium
Published in npj Digital Medicine (2025-05-01)Get full text
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13
Integrating treatment cost reduction strategies and biomarker research to reduce costs and personalize expensive treatments: an example of a self-funding trial in non-small cell lu... by Alessandra I. G. Buma, Berber Piet, Rob ter Heine, Michel M. van den Heuvel, Paul Brinkman, Daan van den Broek, Sjaak Burgers, Francesco Ciompi, Simona M. Cristescu, Bram van Ginneken, Katrien Grünberg, Lizza Hendriks, Jeroen Hiltermann, Firdaus Mohamed Housein, Alwin Huitema, Jakko van Inge, Colin Jacobs, Hans Koenen, Marjolijn Ligtenberg, Anke H. Maitland-van der Zee, Vincent van der Noort, Mathias Prokop, Valesca Rètel, Heinrich Roder, Huub van Rossum, Ruben Smeets, Thomas Würdinger
Published in Frontiers in Pharmacology (2023-11-01)Get full text
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