Search Results - Giulio Formenti

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  1. 1

    Long walk to genomics: History and current approaches to genome sequencing and assembly by Alice Maria Giani, Guido Roberto Gallo, Luca Gianfranceschi, Giulio Formenti

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  2. 2

    The genome sequence of the Hungarian meadow viper, Vipera ursinii rakosiensis (Méhely, 1893) [version 2; peer review: 2 approved] by Bálint Halpern, Ann M. Mc Cartney, Alice Mouton, Judit Vörös, Giulio Formenti

    Published in Wellcome Open Research (2025-01-01)
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  3. 3

    The genome sequence of the Hungarian meadow viper, Vipera ursinii rakosiensis Méhely, 1893 [version 1; peer review: 2 approved] by Bálint Halpern, Ann M. Mc Cartney, Alice Mouton, Judit Vörös, Giulio Formenti

    Published in Wellcome Open Research (2024-07-01)
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  4. 4

    The genome sequence of the common sole, Solea solea (Linnaeus, 1758) [version 1; peer review: 2 approved] by Filip A.M. Volckaert, Enora Geslain, Ann M. Mc Cartney, Alice Mouton, Giulio Formenti

    Published in Wellcome Open Research (2025-01-01)
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  5. 5

    The reference genome of the human diploid cell line RPE-1 by Emilia Volpe, Alessio Colantoni, Luca Corda, Elena Di Tommaso, Franca Pelliccia, Riccardo Ottalevi, Andrea Guarracino, Danilo Licastro, Luigi Faino, Mattia Capulli, Giulio Formenti, Evelyne Tassone, Simona Giunta

    Published in Nature Communications (2025-09-01)
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  6. 6

    Widespread false gene gains caused by duplication errors in genome assemblies by Byung June Ko, Chul Lee, Juwan Kim, Arang Rhie, Dong Ahn Yoo, Kerstin Howe, Jonathan Wood, Seoae Cho, Samara Brown, Giulio Formenti, Erich D. Jarvis, Heebal Kim

    Published in Genome Biology (2022-09-01)
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  7. 7

    Chromosome-level reference genome assembly of the gyrfalcon (Falco rusticolus) and population genomics offer insights into the falcon population in Mongolia by Farooq Omar Al-Ajli, Giulio Formenti, Olivier Fedrigo, Alan Tracey, Ying Sims, Kerstin Howe, Ikdam M. Al-Karkhi, Asmaa Ali Althani, Erich D. Jarvis, Sadequr Rahman, Qasim Ayub

    Published in Scientific Reports (2025-02-01)
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  8. 8

    Chromosome-level genome assembly of the Tyrrhenian tree frog (Hyla sarda) by Josephine R. Paris, Roberta Bisconti, Andrea Chiocchio, Linelle Abueg, Dominic E. Absolon, Tatiana Tilley, Nivesh Jain, Jennifer Balacco, Brian O’Toole, Erich D. Jarvis, Giulio Formenti, Daniele Salvi, Daniele Canestrelli

    Published in Scientific Data (2025-09-01)
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  9. 9

    MitoHiFi: a python pipeline for mitochondrial genome assembly from PacBio high fidelity reads by Marcela Uliano-Silva, João Gabriel R. N. Ferreira, Ksenia Krasheninnikova, Darwin Tree of Life Consortium, Giulio Formenti, Linelle Abueg, James Torrance, Eugene W. Myers, Richard Durbin, Mark Blaxter, Shane A. McCarthy

    Published in BMC Bioinformatics (2023-07-01)
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  10. 10

    The genome sequence of Atlantic Bluefin Tuna, Thunnus thynnus (Linnaeus, 1758) [version 1; peer review: 1 approved, 3 approved with reservations] by Rebekah A. Oomen, Louise Chavarie, Alessia Cariani, Adriana Vella, Agostino Leone, Gustav Hellström, Noel Vella, Ann M. Mc Cartney, Andreas Sundelöf, Tomas Brodin, Giulio Formenti, Fulvio Garibaldi, Fausto Tinti, Petter Lundberg, Mark Blaxter, Alice Mouton

    Published in Wellcome Open Research (2025-03-01)
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  11. 11

    The genome sequence of Artibeus lituratus (Chiroptera, Phyllostomidae, Stenodermatinae; Olfers, 1818). [version 1; peer review: 2 approved] by Erich D. Jarvis, Emma C. Teeling, Melissa R. Ingala, Nancy B. Simmons, Ning Zhang, Myrtani Pieri, Nadolina Brajuka, Giulio Formenti, Brian P. O'Toole, Jonathan L. Gray, Sonja C. Vernes, Meike Mai, Philip Philge, Kirsty McCaffrey

    Published in Wellcome Open Research (2025-04-01)
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  12. 12

    The genome sequence of Molossus alvarezi González-Ruiz, Ramírez-Pulido and Arroyo-Cabrales, 2011 (Chiroptera, Molossidae) [version 1; peer review: 2 approved] by Erich Jarvis, Emma C. Teeling, Melissa R. Ingala, Nancy B. Simmons, Myrtani Pieri, Nadolina Brajuka, Linelle Abueg, Giulio Formenti, Ning Zhang, Brian P. O'Toole, Jonathan L. Gray, Meike Mai, Thomas L Volkert, Philip Philge, Sonja C Vernes, Kirsty McCaffrey

    Published in Wellcome Open Research (2024-09-01)
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  13. 13

    Chromosome-level genome assembly of chub mackerel (Scomber japonicus) from the Indo-Pacific Ocean by Young Ho Lee, Linelle Abueg, Jin-Koo Kim, Young Wook Kim, Olivier Fedrigo, Jennifer Balacco, Giulio Formenti, Kerstin Howe, Alan Tracey, Jonathan Wood, Françoise Thibaud-Nissen, Bo Hye Nam, Eun Soo No, Hye Ran Kim, Chul Lee, Erich D. Jarvis, Heebal Kim

    Published in Scientific Data (2023-12-01)
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  14. 14

    A reference genome for the Harpy Eagle reveals steady demographic decline and chromosomal rearrangements in the origin of Accipitriformes by Lucas Eduardo Costa Canesin, Sibelle T. Vilaça, Renato R. M. Oliveira, Farooq Al-Ajli, Alan Tracey, Ying Sims, Giulio Formenti, Olivier Fedrigo, Aureo Banhos, Tania M. Sanaiotti, Izeni P. Farias, Erich D. Jarvis, Guilherme Oliveira, Tomas Hrbek, Vera Solferini, Alexandre Aleixo

    Published in Scientific Reports (2024-09-01)
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  15. 15

    The genome sequence of Rhynchonycteris naso, Peters, 1867 (Chiroptera, Emballonuridae, Rhynchonycteris) [version 1; peer review: 3 approved] by Erich Jarvis, Emma C. Teeling, Ine Alvarez van Tussenbroek, Martina Nagy, Mirjam Knörnschild, Philip Philge, Brian P. O'Toole, Myrtani Pieri, Nadolina Brajuka, Giulio Formenti, Linelle Abueg, Ning Zhang, Sonja C. Vernes, Thomas L. Volkert, Jonathan L. Gray, Meike Mai

    Published in Wellcome Open Research (2024-07-01)
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  16. 16

    The genome sequence of Glossophaga mutica (Chiroptera, Phyllostomidae, Glossophaginae; Merriam, 1898) [version 1; peer review: 2 approved] by Erich D. Jarvis, Bonhwang Koo, Melissa R. Ingala, Laramie L. Lindsey, Philge Philip, Nancy B. Simmons, Emma C. Teeling, Myrtani Pieri, Linelle Abueg, Giulio Formenti, Larry N. Singh, Ning Zhang, Brian P. O'Toole, Jonathan L. Gray, Meike Mai, Sonja C. Vernes, Kirsty McCaffrey

    Published in Wellcome Open Research (2025-04-01)
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  17. 17

    Ecological diversification of sea catfishes is accompanied by genome-wide signatures of positive selection by Melissa Rincon-Sandoval, Rishi De-Kayne, Stephen D. Shank, Stacy Pirro, Alfred Ko’ou, Linelle Abueg, Alan Tracey, Jackie Mountcastle, Brian O’Toole, Jennifer Balacco, Giulio Formenti, Erich D. Jarvis, Dahiana Arcila, Sergei L. Kosakovsky Pond, Aaron Davis, Devin D. Bloom, Ricardo Betancur-R

    Published in Nature Communications (2024-11-01)
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  18. 18

    A chromosome-level reference genome for the critically endangered Southern Corroboree frog (Pseudophryne corroboree) [version 1; peer review: 2 approved] by Lee Berger, Tiffany A. Kosch, Deon Gilbert, Andrew J. Crawford, David Hunter, Damian Goodall, Linelle Abueg, Michael McFadden, Giulio Formenti, Joanna Collins, Nivesh Jain, Tatiana Tilley, Conor Whelan, Brian O'Toole, Matthieu Muffato, Ira Cooke, Olivier Fedrigo, Bethan Yates, Erich D. Jarvis, Jennifer Balacco, Lee F. Skerratt

    Published in Wellcome Open Research (2025-04-01)
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  19. 19

    Genomic insights into the population structure and adaptive variation of Mullus barbatus in the Mediterranean Sea by Piergiorgio Massa, Henrique G. Leitão, Tereza Manousaki, Alessia Cariani, Hannes Svardal, Dimitris Tsaparis, Rita Cannas, Lorenzo Zane, Tim De Pooter, Maria Teresa Spedicato, Mojca Strazisar, Claudio Ciofi, Alice Ferrari, Genevieve Diedericks, Maria Angela Diroma, Giulio Formenti, Petya Ivanova, Ann M. Mc Cartney, Alice Mouton, Chiara Natali, Ilaria AM Marino, Costas S. Tsigenopoulos

    Published in BMC Ecology and Evolution (2025-10-01)
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  20. 20

    A pangenome graph reference of 30 chicken genomes allows genotyping of large and complex structural variants by Edward S. Rice, Antton Alberdi, James Alfieri, Giridhar Athrey, Jennifer R. Balacco, Philippe Bardou, Heath Blackmon, Mathieu Charles, Hans H. Cheng, Olivier Fedrigo, Steven R. Fiddaman, Giulio Formenti, Laurent A. F. Frantz, M. Thomas P. Gilbert, Cari J. Hearn, Erich D. Jarvis, Christophe Klopp, Sofia Marcos, Andrew S. Mason, Deborah Velez-Irizarry, Luohao Xu, Wesley C. Warren

    Published in BMC Biology (2023-11-01)
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