Search Results - John A Capra

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  1. 1

    What is a placental mammal anyway? by Patrick Abbot, John A Capra

    Published in eLife (2017-09-01)
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  2. 2

    ProteinHistorian: tools for the comparative analysis of eukaryote protein origin. by John A Capra, Alexander G Williams, Katherine S Pollard

    Published in PLoS Computational Biology (2012-01-01)
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  3. 3

    The 3D mutational constraint on amino acid sites in the human proteome by Bian Li, Dan M. Roden, John A. Capra

    Published in Nature Communications (2022-06-01)
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  4. 4

    Short DNA sequence patterns accurately identify broadly active human enhancers by Laura L. Colbran, Ling Chen, John A. Capra

    Published in BMC Genomics (2017-07-01)
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  5. 5

    Diverse functions associate with non-coding polymorphisms shared between humans and chimpanzees by Keila Velazquez-Arcelay, Mary Lauren Benton, John A. Capra

    Published in BMC Ecology and Evolution (2022-05-01)
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  6. 6

    Disease-specific prioritization of non-coding GWAS variants based on chromatin accessibility by Qianqian Liang, Abin Abraham, John A. Capra, Dennis Kostka

    Published in HGG Advances (2024-07-01)
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  7. 7

    Quantifying the contribution of Neanderthal introgression to the heritability of complex traits by Evonne McArthur, David C. Rinker, John A. Capra

    Published in Nature Communications (2021-07-01)
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  8. 8

    Signatures of Recent Positive Selection in Enhancers Across 41 Human Tissues by Jiyun M. Moon, John A. Capra, Patrick Abbot, Antonis Rokas

    Published in G3: Genes, Genomes, Genetics (2019-08-01)
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  9. 9

    G-quadruplex DNA sequences are evolutionarily conserved and associated with distinct genomic features in Saccharomyces cerevisiae. by John A Capra, Katrin Paeschke, Mona Singh, Virginia A Zakian

    Published in PLoS Computational Biology (2010-07-01)
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  10. 10

    Mosaic patterns of selection in genomic regions associated with diverse human traits. by Abin Abraham, Abigail L LaBella, John A Capra, Antonis Rokas

    Published in PLoS Genetics (2022-11-01)
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  11. 11

    The immune deficiency and c-Jun N-terminal kinase pathways drive the functional integration of the immune and circulatory systems of mosquitoes by Yan Yan, Leah T. Sigle, David C. Rinker, Tania Y. Estévez-Lao, John A. Capra, Julián F. Hillyer

    Published in Open Biology (2022-09-01)
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  12. 12

    Pre-conception clinical risk factors differ between spontaneous and indicated preterm birth in a densely phenotyped EHR cohort by Jean M. Costello, Hannah Takasuka, Jacquelyn Roger, Ophelia Yin, Alice Tang, Tomiko Oskotsky, Marina Sirota, John A. Capra

    Published in BMC Pregnancy and Childbirth (2025-02-01)
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  13. 13

    Mapping kinase domain resistance mechanisms for the MET receptor tyrosine kinase via deep mutational scanning by Gabriella O Estevam, Edmond Linossi, Jingyou Rao, Christian B Macdonald, Ashraya Ravikumar, Karson M Chrispens, John A Capra, Willow Coyote-Maestas, Harold Pimentel, Eric A Collisson, Natalia Jura, James S Fraser

    Published in eLife (2025-02-01)
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  14. 14

    Dense phenotyping from electronic health records enables machine learning-based prediction of preterm birth by Abin Abraham, Brian Le, Idit Kosti, Peter Straub, Digna R. Velez-Edwards, Lea K. Davis, J. M. Newton, Louis J. Muglia, Antonis Rokas, Cosmin A. Bejan, Marina Sirota, John A. Capra

    Published in BMC Medicine (2022-09-01)
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  15. 15

    Cell‐Specific Transposable Element and Gene Expression Analysis Across Systemic Lupus Erythematosus Phenotypes by Zachary Cutts, Sarah Patterson, Lenka Maliskova, Kimberly E. Taylor, Chun Jimmie Ye, Maria Dall'Era, Jinoos Yazdany, Lindsey A. Criswell, Gabriela K. Fragiadakis, Charles Langelier, John A. Capra, Marina Sirota, Cristina M. Lanata

    Published in ACR Open Rheumatology (2024-11-01)
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  16. 16

    High-throughput functional mapping of variants in an arrhythmia gene, KCNE1, reveals novel biology by Ayesha Muhammad, Maria E. Calandranis, Bian Li, Tao Yang, Daniel J. Blackwell, M. Lorena Harvey, Jeremy E. Smith, Zerubabell A. Daniel, Ashli E. Chew, John A. Capra, Kenneth A. Matreyek, Douglas M. Fowler, Dan M. Roden, Andrew M. Glazer

    Published in Genome Medicine (2024-05-01)
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  17. 17

    Illuminating the function of the orphan transporter, SLC22A10, in humans and other primates by Sook Wah Yee, Luis Ferrández-Peral, Pol Alentorn-Moron, Claudia Fontsere, Merve Ceylan, Megan L. Koleske, Niklas Handin, Virginia M. Artegoitia, Giovanni Lara, Huan-Chieh Chien, Xujia Zhou, Jacques Dainat, Arthur Zalevsky, Andrej Sali, Colin M. Brand, Finn D. Wolfreys, Jia Yang, Jason E. Gestwicki, John A. Capra, Per Artursson, John W. Newman, Tomàs Marquès-Bonet, Kathleen M. Giacomini

    Published in Nature Communications (2024-05-01)
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