Search Results - Jonathan M Mudge

  • Showing 1 - 9 results of 9
Refine Results
  1. 1

    Thousands of human non-AUG extended proteoforms lack evidence of evolutionary selection among mammals by Alla D. Fedorova, Stephen J. Kiniry, Dmitry E. Andreev, Jonathan M. Mudge, Pavel V. Baranov

    Published in Nature Communications (2022-12-01)
    Get full text
    Article


  2. 2

    Addendum: Thousands of human non-AUG extended proteoforms lack evidence of evolutionary selection among mammals by Alla D. Fedorova, Stephen J. Kiniry, Dmitry E. Andreev, Jonathan M. Mudge, Pavel V. Baranov

    Published in Nature Communications (2024-01-01)
    Get full text
    Article


  3. 3

    Evidence for a novel overlapping coding sequence in POLG initiated at a CUG start codon by Yousuf A. Khan, Irwin Jungreis, James C. Wright, Jonathan M. Mudge, Jyoti S. Choudhary, Andrew E. Firth, Manolis Kellis

    Published in BMC Genetics (2020-03-01)
    Get full text
    Article


  4. 4

    Biophysical characterization of high-confidence, small human proteins by A.M. Whited, Irwin Jungreis, Jeffre Allen, Christina L. Cleveland, Jonathan M. Mudge, Manolis Kellis, John L. Rinn, Loren E. Hough

    Published in Biophysical Reports (2024-09-01)
    Get full text
    Article


  5. 5

    Extension of human lncRNA transcripts by RACE coupled with long-read high-throughput sequencing (RACE-Seq) by Julien Lagarde, Barbara Uszczynska-Ratajczak, Javier Santoyo-Lopez, Jose Manuel Gonzalez, Electra Tapanari, Jonathan M. Mudge, Charles A. Steward, Laurens Wilming, Andrea Tanzer, Cédric Howald, Jacqueline Chrast, Alicia Vela-Boza, Antonio Rueda, Francisco J. Lopez-Domingo, Joaquin Dopazo, Alexandre Reymond, Roderic Guigó, Jennifer Harrow

    Published in Nature Communications (2016-08-01)
    Get full text
    Article


  6. 6

    Cell type-specific novel long non-coding RNA and circular RNA in the BLUEPRINT hematopoietic transcriptomes atlas by Luigi Grassi, Osagie G. Izuogu, Natasha A.N. Jorge, Denis Seyres, Mariona Bustamante, Frances Burden, Samantha Farrow, Neda Farahi, Fergal J. Martin, Adam Frankish, Jonathan M. Mudge, Myrto Kostadima, Romina Petersen, John J. Lambourne, Sophia Rowlston, Enca Martin-Rendon, Laura Clarke, Kate Downes, Xavier Estivill, Paul Flicek, Joost H.A. Martens, Marie-Laure Yaspo, Hendrik G. Stunnenberg, Willem H. Ouwehand, Fabio Passetti, Ernest Turro, Mattia Frontini

    Published in Haematologica (2020-07-01)
    Get full text
    Article


  7. 7

    Evidence for transcript networks composed of chimeric RNAs in human cells. by Sarah Djebali, Julien Lagarde, Philipp Kapranov, Vincent Lacroix, Christelle Borel, Jonathan M Mudge, Cédric Howald, Sylvain Foissac, Catherine Ucla, Jacqueline Chrast, Paolo Ribeca, David Martin, Ryan R Murray, Xinping Yang, Lila Ghamsari, Chenwei Lin, Ian Bell, Erica Dumais, Jorg Drenkow, Michael L Tress, Josep Lluís Gelpí, Modesto Orozco, Alfonso Valencia, Nynke L van Berkum, Bryan R Lajoie, Marc Vidal, John Stamatoyannopoulos, Philippe Batut, Alex Dobin, Jennifer Harrow, Tim Hubbard, Job Dekker, Adam Frankish, Kourosh Salehi-Ashtiani, Alexandre Reymond, Stylianos E Antonarakis, Roderic Guigó, Thomas R Gingeras

    Published in PLoS ONE (2012-01-01)
    Get full text
    Article


  8. 8

    Author Correction: Community benchmarking and evaluation of human unannotated microprotein detection by mass spectrometry based proteomics by Aaron Wacholder, Eric W. Deutsch, Leron W. Kok, Jip T. van Dinter, Jiwon Lee, James C. Wright, Sebastien Leblanc, Ayodya H. Jayatissa, Kevin Jiang, Ihor Arefiev, Kevin Cao, Francis Bourassa, Felix-Antoine Trifiro, Michal Bassani-Sternberg, Pavel V. Baranov, Annelies Bogaert, Sonia Chothani, Ivo Fierro-Monti, Daria Fijalkowska, Kris Gevaert, Norbert Hubner, Jonathan M. Mudge, Jorge Ruiz-Orera, Jana Schulz, Juan Antonio Vizcaíno, John R. Prensner, Marie A. Brunet, Thomas F. Martinez, Sarah A. Slavoff, Xavier Roucou, Jyoti S. Choudhary, Sebastiaan van Heesch, Robert L. Moritz, Anne-Ruxandra Carvunis

    Published in Nature Communications (2026-06-01)
    Get full text
    Article


  9. 9

    Community benchmarking and evaluation of human unannotated microprotein detection by mass spectrometry based proteomics by Aaron Wacholder, Eric W. Deutsch, Leron W. Kok, Jip T. van Dinter, Jiwon Lee, James C. Wright, Sebastien Leblanc, Ayodya H. Jayatissa, Kevin Jiang, Ihor Arefiev, Kevin Cao, Francis Bourassa, Felix-Antoine Trifiro, Michal Bassani-Sternberg, Pavel V. Baranov, Annelies Bogaert, Sonia Chothani, Ivo Fierro-Monti, Daria Fijalkowska, Kris Gevaert, Norbert Hubner, Jonathan M. Mudge, Jorge Ruiz-Orera, Jana Schulz, Juan Antonio Vizcaíno, John R. Prensner, Marie A. Brunet, Thomas F. Martinez, Sarah A. Slavoff, Xavier Roucou, Jyoti S. Choudhary, Sebastiaan van Heesch, Robert L. Moritz, Anne-Ruxandra Carvunis

    Published in Nature Communications (2026-01-01)
    Get full text
    Article


Search Tools: