Search Results - Marcel Huntemann
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Discovery of a novel filamentous prophage in the genome of the Mimosa pudica microsymbiont Cupriavidus taiwanensis STM 6018 by Agnieszka Klonowska, Julie Ardley, Lionel Moulin, Jaco Zandberg, Delphine Patrel, Margaret Gollagher, Dora Marinova, T. B. K. Reddy, Neha Varghese, Marcel Huntemann, Tanja Woyke, Rekha Seshadri, Natalia Ivanova, Nikos Kyrpides, Wayne Reeve
Published in Frontiers in Microbiology (2023-02-01)Get full text
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Draft genome sequence of Marinobacterium rhizophilum CL-YJ9T (DSM 18822T), isolated from the rhizosphere of the coastal tidal-flat plant Suaeda japonica by Dong Han Choi, Gwang II Jang, Alla Lapidus, Alex Copeland, T. B. K. Reddy, Supratim Mukherjee, Marcel Huntemann, Neha Varghese, Natalia Ivanova, Manoj Pillay, Brian J. Tindall, Markus Göker, Tanja Woyke, Hans-Peter Klenk, Nikos C. Kyrpides, Byung Cheol Cho
Published in Standards in Genomic Sciences (2017-10-01)Get full text
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Terabase-Scale Coassembly of a Tropical Soil Microbiome by Robert Riley, Robert M. Bowers, Antonio Pedro Camargo, Ashley Campbell, Rob Egan, Emiley A. Eloe-Fadrosh, Brian Foster, Steven Hofmeyr, Marcel Huntemann, Matthew Kellom, Jeffrey A. Kimbrel, Leonid Oliker, Katherine Yelick, Jennifer Pett-Ridge, Asaf Salamov, Neha J. Varghese, Alicia Clum
Published in Microbiology Spectrum (2023-08-01)Get full text
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High quality permanent draft genome sequence of Chryseobacterium bovis DSM 19482T, isolated from raw cow milk by Sivan Laviad-Shitrit, Markus Göker, Marcel Huntemann, Alicia Clum, Manoj Pillay, Krishnaveni Palaniappan, Neha Varghese, Natalia Mikhailova, Dimitrios Stamatis, T. B. K. Reddy, Chris Daum, Nicole Shapiro, Victor Markowitz, Natalia Ivanova, Tanja Woyke, Hans-Peter Klenk, Nikos C. Kyrpides, Malka Halpern
Published in Standards in Genomic Sciences (2017-05-01)Get full text
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Tetranucleotide frequencies differentiate genomic boundaries and metabolic strategies across environmental microbiomes by Matthew Kellom, Maureen Berg, I-Min A. Chen, Ken Chu, Alicia Clum, Marcel Huntemann, Natalia N. Ivanova, Nikos C. Kyrpides, Supratim Mukherjee, T. B. K. Reddy, Simon Roux, Rekha Seshadri, Gitta Szabo, Neha J. Varghese, Tanja Woyke, Emiley A. Eloe-Fadrosh
Published in mSystems (2025-08-01)Get full text
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Microbial Metagenomes Across a Complete Phytoplankton Bloom Cycle: High-Resolution Sampling Every 4 Hours Over 22 Days by Brook L. Nunn, Emma Timmins-Schiffman, Miranda C. Mudge, Deanna L. Plubell, Gabriella Chebli, Julia Kubanek, Michael Riffle, William S. Noble, Elizabeth Harvey, Tasman A. Nunn, Tatiana Rynearson, Marcel Huntemann, Kurt LaButti, Brian Foster, Bryce Foster, Simon Roux, Krishnaveni Palaniappan, Supratim Mukherjee, T. B. K. Reddy, Chris Daum, Alex Copeland, I-Min A. Chen, Natalia N. Ivanova, Nikos C. Kyrpides, Tijana Glavina del Rio, Emiley A. Eloe-Fadrosh
Published in Scientific Data (2024-11-01)Get full text
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Author Correction: Microbial Metagenomes Across a Complete Phytoplankton Bloom Cycle: High-Resolution Sampling Every 4 Hours Over 22 Days by Brook L. Nunn, Emma Timmins-Schiffman, Miranda C. Mudge, Deanna L. Plubell, Gabriella Chebli, Julia Kubanek, Michael Riffle, William S. Noble, Elizabeth Harvey, Tasman A. Nunn, Tatiana Rynearson, Marcel Huntemann, Kurt LaButti, Brian Foster, Bryce Foster, Simon Roux, Krishnaveni Palaniappan, Supratim Mukherjee, T. B. K. Reddy, Chris Daum, Alex Copeland, I-Min A. Chen, Natalia N. Ivanova, Nikos C. Kyrpides, Tijana Glavina del Rio, Emiley A. Eloe-Fadrosh
Published in Scientific Data (2025-01-01)Get full text
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Challenges in Bioinformatics Workflows for Processing Microbiome Omics Data at Scale by Bin Hu, Shane Canon, Emiley A. Eloe-Fadrosh, Anubhav, Michal Babinski, Yuri Corilo, Karen Davenport, William D. Duncan, Kjiersten Fagnan, Mark Flynn, Brian Foster, David Hays, Marcel Huntemann, Elais K. Player Jackson, Julia Kelliher, Po-E. Li, Chien-Chi Lo, Douglas Mans, Lee Ann McCue, Nigel Mouncey, Christopher J. Mungall, Paul D. Piehowski, Samuel O. Purvine, Montana Smith, Neha Jacob Varghese, Donald Winston, Yan Xu, Patrick S. G. Chain
Published in Frontiers in Bioinformatics (2022-01-01)Get full text
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Coassembly and binning of a twenty-year metagenomic time-series from Lake Mendota by Tiffany Oliver, Neha Varghese, Simon Roux, Frederik Schulz, Marcel Huntemann, Alicia Clum, Brian Foster, Bryce Foster, Robert Riley, Kurt LaButti, Robert Egan, Patrick Hajek, Supratim Mukherjee, Galina Ovchinnikova, T. B. K. Reddy, Sara Calhoun, Richard D. Hayes, Robin R. Rohwer, Zhichao Zhou, Chris Daum, Alex Copeland, I-Min A. Chen, Natalia N. Ivanova, Nikos C. Kyrpides, Nigel J. Mouncey, Tijana Glavina del Rio, Igor V. Grigoriev, Steven Hofmeyr, Leonid Oliker, Katherine Yelick, Karthik Anantharaman, Katherine D. McMahon, Tanja Woyke, Emiley A. Eloe-Fadrosh
Published in Scientific Data (2024-09-01)Get full text
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Multiomics in the central Arctic Ocean for benchmarking biodiversity change. by Thomas Mock, William Boulton, John-Paul Balmonte, Kevin Barry, Stefan Bertilsson, Jeff Bowman, Moritz Buck, Gunnar Bratbak, Emelia J Chamberlain, Michael Cunliffe, Jessie Creamean, Oliver Ebenhöh, Sarah Lena Eggers, Allison A Fong, Jessie Gardner, Rolf Gradinger, Mats A Granskog, Charlotte Havermans, Thomas Hill, Clara J M Hoppe, Kerstin Korte, Aud Larsen, Oliver Müller, Anja Nicolaus, Ellen Oldenburg, Ovidiu Popa, Swantje Rogge, Hendrik Schäfer, Katyanne Shoemaker, Pauline Snoeijs-Leijonmalm, Anders Torstensson, Klaus Valentin, Anna Vader, Kerrie Barry, I-M A Chen, Alicia Clum, Alex Copeland, Chris Daum, Emiley Eloe-Fadrosh, Brian Foster, Bryce Foster, Igor V Grigoriev, Marcel Huntemann, Natalia Ivanova, Alan Kuo, Nikos C Kyrpides, Supratim Mukherjee, Krishnaveni Palaniappan, T B K Reddy, Asaf Salamov, Simon Roux, Neha Varghese, Tanja Woyke, Dongying Wu, Richard M Leggett, Vincent Moulton, Katja Metfies
Published in PLoS Biology (2022-10-01)Get full text
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