Search Results - Michael Hackenberg

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  1. 1

    MethylExtract: High-Quality methylation maps and SNV calling from whole genome bisulfite sequencing data [v2; ref status: indexed, http://f1000r.es/301] by Guillermo Barturen, Antonio Rueda, José L. Oliver, Michael Hackenberg

    Published in F1000Research (2014-02-01)
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  2. 2

    MethylExtract: High-Quality methylation maps and SNV calling from whole genome bisulfite sequencing data [v1; ref status: indexed, http://f1000r.es/20o] by Guillermo Barturen, Antonio Rueda, José L. Oliver, Michael Hackenberg

    Published in F1000Research (2013-10-01)
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  3. 3

    Discovery of novel microRNAs in rat kidney using next generation sequencing and microarray validation. by Fanxue Meng, Michael Hackenberg, Zhiguang Li, Jian Yan, Tao Chen

    Published in PLoS ONE (2012-01-01)
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  4. 4

    Assessing the complementary information from an increased number of biologically relevant features in liquid biopsy-derived RNA-Seq data by Stavros Giannoukakos, Silvia D'Ambrosi, Danijela Koppers-Lalic, Cristina Gómez-Martín, Alberto Fernandez, Michael Hackenberg

    Published in Heliyon (2024-03-01)
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  5. 5

    Selective isolation of extracellular vesicles from minimally processed human plasma as a translational strategy for liquid biopsies by Diogo Fortunato, Stavros Giannoukakos, Ana Giménez-Capitán, Michael Hackenberg, Miguel A. Molina-Vila, Nataša Zarovni

    Published in Biomarker Research (2022-08-01)
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  6. 6

    IsoSeek for unbiased and UMI-informed sequencing of miRNAs from low input samples at single-nucleotide resolution by Monique A.J. van Eijndhoven, Chantal Scheepbouwer, Ernesto Aparicio-Puerta, Michael Hackenberg, D. Michiel Pegtel

    Published in STAR Protocols (2023-12-01)
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  7. 7

    Genome-Wide Analysis of microRNA Expression Profile in Roots and Leaves of Three Wheat Cultivars under Water and Drought Conditions by Cristina Gómez-Martín, Hui Zhou, José María Medina, Ernesto Aparicio-Puerta, Bujun Shi, Michael Hackenberg

    Published in Biomolecules (2023-02-01)
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  8. 8

    Transcriptional Dynamics and Candidate Genes Involved in Pod Maturation of Common Bean (<i>Phaseolus vulgaris</i> L.) by Cristina Gómez-Martín, Carmen Capel, Ana M. González, Ricardo Lebrón, Fernando J. Yuste-Lisbona, Michael Hackenberg, José L. Oliver, Marta Santalla, Rafael Lozano

    Published in Plants (2020-04-01)
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  9. 9

    Functional Enrichment Analysis of Regulatory Elements by Adrian Garcia-Moreno, Raul López-Domínguez, Juan Antonio Villatoro-García, Alberto Ramirez-Mena, Ernesto Aparicio-Puerta, Michael Hackenberg, Alberto Pascual-Montano, Pedro Carmona-Saez

    Published in Biomedicines (2022-03-01)
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  10. 10

    Small RNA Landscape of Platelet Dust: Platelet-Derived Extracellular Vesicles from Patients with Non-Small-Cell Lung Cancer by Mafalda Antunes-Ferreira, Ilias Glogovitis, Diogo Fortunato, Silvia D’Ambrosi, Mariona Colom Saborit, Galina Yahubyan, Vesselin Baev, Michael Hackenberg, Natasa Zarovni, Thomas Wurdinger, Danijela Koppers-Lalic

    Published in Non-Coding RNA (2025-05-01)
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  11. 11

    Viral Ubiquitin Ligase Stimulates Selective Host MicroRNA Expression by Targeting ZEB Transcriptional Repressors by Gabriel Lutz, Igor Jurak, Eui Tae Kim, Ju Youn Kim, Michael Hackenberg, Andrew Leader, Michelle L. Stoller, Donna M. Fekete, Matthew D. Weitzman, Donald M. Coen, Angus C. Wilson

    Published in Viruses (2017-08-01)
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  12. 12

    The Virus-Induced Upregulation of the miR-183/96/182 Cluster and the FoxO Family Protein Members Are Not Required for Efficient Replication of HSV-1 by Andreja Zubković, Ines Žarak, Ivana Ratkaj, Filip Rokić, Maja Jekić, Marina Pribanić Matešić, Ricardo Lebrón, Cristina Gómez-Martín, Berislav Lisnić, Vanda Juranić Lisnić, Stipan Jonjić, Dongli Pan, Oliver Vugrek, Michael Hackenberg, Igor Jurak

    Published in Viruses (2022-07-01)
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  13. 13

    Multiplex Analysis of CircRNAs from Plasma Extracellular Vesicle-Enriched Samples for the Detection of Early-Stage Non-Small Cell Lung Cancer by Carlos Pedraz-Valdunciel, Stavros Giannoukakos, Ana Giménez-Capitán, Diogo Fortunato, Martyna Filipska, Jordi Bertran-Alamillo, Jillian W. P. Bracht, Ana Drozdowskyj, Joselyn Valarezo, Natasa Zarovni, Alberto Fernández-Hilario, Michael Hackenberg, Andrés Aguilar-Hernández, Miguel Ángel Molina-Vila, Rafael Rosell

    Published in Pharmaceutics (2022-09-01)
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  14. 14

    Digital multiplexed analysis of circular RNAs in FFPE and fresh non‐small cell lung cancer specimens by Carlos Pedraz‐Valdunciel, Stavros Giannoukakos, Nicolas Potie, Ana Giménez‐Capitán, Chung‐Ying Huang, Michael Hackenberg, Alberto Fernandez‐Hilario, Jill Bracht, Martyna Filipska, Erika Aldeguer, Sonia Rodríguez, Trever G. Bivona, Sarah Warren, Cristina Aguado, Masaoki Ito, Andrés Aguilar‐Hernández, Miguel Angel Molina‐Vila, Rafael Rosell

    Published in Molecular Oncology (2022-06-01)
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  15. 15

    Genome sequences of four Ixodes species expands understanding of tick evolution by Alexandra Cerqueira de Araujo, Benjamin Noel, Anthony Bretaudeau, Karine Labadie, Matéo Boudet, Nachida Tadrent, Benjamin Istace, Salima Kritli, Corinne Cruaud, Robert Olaso, Jean-François Deleuze, Maarten J. Voordouw, Caroline Hervet, Olivier Plantard, Aya Zamoto-Niikura, Thomas Chertemps, Martine Maïbèche, Frédérique Hilliou, Gaëlle Le Goff, Jindřich Chmelař, Vilém Mazák, Mohamed Amine Jmel, Michalis Kotsyfakis, José María Medina, Michael Hackenberg, Ladislav Šimo, Fotini A. Koutroumpa, Patrick Wincker, Petr Kopáček, Jan Perner, Jean-Marc Aury, Claude Rispe

    Published in BMC Biology (2025-01-01)
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  16. 16

    Extracellular vesicle miRNA predict FDG‐PET status in patients with classical Hodgkin Lymphoma by Esther E. E. Drees, Margaretha G. M. Roemer, Nils J. Groenewegen, Jennifer Perez‐Boza, Monique A. J. vanEijndhoven, Leah I. Prins, Sandra A. W. M. Verkuijlen, Xuan‐Mai Tran, Julia Driessen, G. J. C. Zwezerijnen, Phylicia Stathi, Kevin Mol, Joey J. J. P. Karregat, Aikaterini Kalantidou, Andrea Vallés‐Martí, T. J. Molenaar, Ernesto Aparicio‐Puerta, Erik vanDijk, Bauke Ylstra, Catharina G. M. Groothuis‐Oudshoorn, Michael Hackenberg, Daphne deJong, Josée M. Zijlstra, D. Michiel Pegtel

    Published in Journal of Extracellular Vesicles (2021-07-01)
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